| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0722 |
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| Symbol | yojN |
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| ID | 6270768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 680546 |
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| End bp | 683206 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641724908 |
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| Product | phosphotransfer intermediate protein in two-component regulatory system with RcsBC |
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| Protein accession | YP_001879437 |
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| Protein GI | 187730348 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00389161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCAGA AAGAGACAAC GGCCACGACC CGCTTTTCAC TCCTACCGGG GAGCATTACC
CGCTTCTTTT TACTGTTGAT CATTGTGTTA CTGGTGACGA TGGGTGTAAT GGTACAAAGC
GCCGTTAACG CATGGCTGAA AGATAAAAGT TACCAGATTG TCGACATTAC CCACGCTATC
CAAAAGCGCG TCAATACCTG GCGTTACGTG ACCTGGCAGA TCTACGACAA CATTGCCGCG
ACGACCTCCC CCTCCTCCGG CGAAGGTTTC CTGAAACAGG ATGTCTACTA TCTGGAGAAA
CCGCGCCGCA AAACGGAAGC GTTAATCTTT GGCTCTCACG ACAACTCAAC GCTTGAGATG
ACTCAGCGGA TGTCCACCTA TCTGGACACA TTGTGGGGCG CAGAAAATGT ACCGTGGTCG
ATGTATTACC TGAATGGTCA GGATAACAGT CTGGTGCTGA TCTCAACCCT GCCCCTCAAA
GATCTCACCT CCGGATTTAA AGAATCGACC GTCAGCGACA TTGTTGATTC ACGTCGTGCA
GAGATGTTGC AACAGGCCAA CGCCCTCGAT GAACGCGAAA GTTTTTCTAA CATGCGCCGC
CTGGCCTGGC AGAACGGTCA TTACTTTACC TTGCGTACCA CGTTCAACCA GCCGGGACAT
CTGGCAACGG TCGTAGCTTT TGATCTACCG ATTAATGATT TGATCCCACC GGGTATGCCG
CTGGACAGTT TCCGCCTTGA GCCAGACGCG ACGGCAACGG GAGACAATGA TAATGAGAAA
GAAGGGACGG ATAGCGTCAG TATCCACTTT AACAGTACGA AGATTGAAAT CTCCTCGGCA
CTCAACTCTA CCGATGTGCG CCTGGTCTGG CAGGTTCCTT ATGGCACCTT ATTGCTGGAT
ACGTTGCAAA ACATTCTGCT GCCACTGCTG CTGAACATCG GTTTGCTGGC GCTGGCGTTA
TTTGGCTATA CCACATTCCG CCATTTCTCC AGCCGCAGTA CAGAAAGTCT ACCCAGCACG
GCGGTCAATA ACGAATTGCG CATTTTACGG GCAATTAATG AAGAGATAGT CTCACTGCTG
CCGCTCGGCC TGCTGGTTCA CGATCAGGAA TCGAACCGCA CTGTCATAAG TAACAAAATT
GCCGATCATT TGCTGCCGCA TTTGAATCTG CAAAACATCA CCACCATGGC GGAACAGCAT
CAGGGGATTA TTCAGGCGAC GATCAATAAC GAGCTGTATG AGATCCGCAT GTTCCGCAGC
CAGGTCGCGC CGCGCACACA AATTTTCATT ATTCGCGATC AGGATCGCGA AGTGCTGGTA
AACAAGAAAC TCAAGCAGGC GCAGCGTCTG TATGAGAAAA ACCAGCAGGG GCGGATGACC
TTTATGAAAA ACATTGGCGA TGCGCTGAAA GAACCCGCAC AGTCCCTGGC GGAGAGCGCG
GCTAAACTCA ACGCCCCGGA AAGCAAACAA CTGGCGAATC AGGCAGATGT GCTGGTGCGG
CTGGTCGATG AAATACAGTT AGCGAACATG CTTGCGGACG ATAGCTGGAA AAGTGAGACG
GTGCTGTTCT CCGTGCAGGA TTTAATTGAT GAAGTTGTGC CTTCAGTGTT GCCTGCCATC
AAGCGTAAAG GTCTGCAACT GCTGATTAAC AATCATCTGA AAGCACACGA TATGCGCCGC
GGCGATCGCG ATGCCTTACG ACGTATTTTG CTGCTACTGA TGCAATATGC CGTGACCTCA
ACGCAATTGG GAAAAATCAC CCTTGAGGTT GATCAGGATG AGTCCTCTGA AGACCGCCTG
ACATTCCGCA TTCTGGACAC GGGAGAAGGC GTAAGTATTC ATGAAATGGA TAATTTGCAC
TTCCCGTTTA TCAACCAGCC CCAAAACGAT CGCTATGGCA AGGCGGACCC GCTGGCATTC
TGGCTGAGCG ATCAACTGGC GCGTAAACTG GGCGGTCATT TAAACATCAA AACGCGGGAT
GGGCTTGGTA CACGCTACTC TGTGCATATC AAAATGCTCG CCGCTGACCC GGAAGTTGAA
GAGGAAGAAG AGCGTTTACT GGATGATGTC TGCGTAATGG TGGATGTTAC TTCGGCAGAA
ATTCGGAATA TTGTCACTCG CCAGTTAGAA AATTGGGGTG CAACCTGTAT CACACCCGAT
GAAAGATTAA TTAGTCAAGA TTATGATATC TTTTTAACGG ATAATCCGTC TAATCTTACT
GCCTCTGGCT TGCTTTTAAG CGATGATGAG TCTGGCGTAC GAGAAATTGG GCCTGGTCAA
TTGTGCGTCA ACTTCAATAT GAGCAACGCT ATGCAGGAAG CGGTCTTACA ATTAATTGAA
GTGCAACTGG CGCAGGAAGA GGTGACAGAA TCGCCTCTGG GCGGAGATGA AAATGCGCAA
CTCCATGCCA GCGGCTATTA TGCGCTCTTT GTAGACACAG TACCGGATGA TGTTAAGAGG
CTGTATACTG AAGCAGCAAC CAGTGACTTT GCTGCGTTAG CCCAAACGGC TCATCGTCTT
AAAGGCGTAT TTGCCATGCT AAATCTGGTA CCCGGCAAGC AGTTATGTGA AACGCTGGAA
CATCTGATTC GTGAGAAGGA TGTTCCAGGA ATAGAAAAAT ACATCAGCGA CATTGACAGT
TATGTCAAGA GCTTGCTGTA G
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| Protein sequence | MRQKETTATT RFSLLPGSIT RFFLLLIIVL LVTMGVMVQS AVNAWLKDKS YQIVDITHAI
QKRVNTWRYV TWQIYDNIAA TTSPSSGEGF LKQDVYYLEK PRRKTEALIF GSHDNSTLEM
TQRMSTYLDT LWGAENVPWS MYYLNGQDNS LVLISTLPLK DLTSGFKEST VSDIVDSRRA
EMLQQANALD ERESFSNMRR LAWQNGHYFT LRTTFNQPGH LATVVAFDLP INDLIPPGMP
LDSFRLEPDA TATGDNDNEK EGTDSVSIHF NSTKIEISSA LNSTDVRLVW QVPYGTLLLD
TLQNILLPLL LNIGLLALAL FGYTTFRHFS SRSTESLPST AVNNELRILR AINEEIVSLL
PLGLLVHDQE SNRTVISNKI ADHLLPHLNL QNITTMAEQH QGIIQATINN ELYEIRMFRS
QVAPRTQIFI IRDQDREVLV NKKLKQAQRL YEKNQQGRMT FMKNIGDALK EPAQSLAESA
AKLNAPESKQ LANQADVLVR LVDEIQLANM LADDSWKSET VLFSVQDLID EVVPSVLPAI
KRKGLQLLIN NHLKAHDMRR GDRDALRRIL LLLMQYAVTS TQLGKITLEV DQDESSEDRL
TFRILDTGEG VSIHEMDNLH FPFINQPQND RYGKADPLAF WLSDQLARKL GGHLNIKTRD
GLGTRYSVHI KMLAADPEVE EEEERLLDDV CVMVDVTSAE IRNIVTRQLE NWGATCITPD
ERLISQDYDI FLTDNPSNLT ASGLLLSDDE SGVREIGPGQ LCVNFNMSNA MQEAVLQLIE
VQLAQEEVTE SPLGGDENAQ LHASGYYALF VDTVPDDVKR LYTEAATSDF AALAQTAHRL
KGVFAMLNLV PGKQLCETLE HLIREKDVPG IEKYISDIDS YVKSLL
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