| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0721 |
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| Symbol | rcsB |
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| ID | 6271588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 679879 |
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| End bp | 680565 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641724907 |
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| Product | transcriptional regulator RcsB |
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| Protein accession | YP_001879436 |
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| Protein GI | 187730830 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.000245188 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAAGAG CTTGCTGTAG CAAGGTAGCC TATTACATGA ACAATATGAA CGTAATTATT
GCCGATGACC ATCCGATAGT CTTGTTCGGT ATTCGCAAAT CACTTGAGCA AATTGAGTGG
GTGAATGTTG TCGGCGAATT TGAAGACTCT ACAGCACTGA TCAACAACCT GCCGAAACTG
GATGCGCATG TGTTGATTAC CGATCTCTCC ATGCCTGGCG ATAAGTACGG CGATGGCATT
ACCTTAATCA AGTACATCAA GCGCCATTTC CCAAGCCTGT CGATCATTGT TCTGACTATG
AACAACAACC CGGCGATTCT TAGTGCGGTA TTGGATCTGG ATATCGAAGG GATCGTGCTG
AAACAAGGTG CACCGACCGA TCTGCCGAAA GCTCTCGCCG CGCTGCAGAA AGGGAAGAAA
TTTACCCCGG AAAGCGTTTC TCGCCTGTTG GAAAAAATCA GTGCTGGTGG TTACGGTGAC
AAGCGTCTCT CGCCAAAAGA GAGTGAAGTT CTGCGCCTGT TTGCGGAAGG CTTCTTGGTG
ACCGAGATCG CTAAAAAGCT GAACCGCAGT ATTAAAACCA TCAGTAGCCA GAAGAAATCT
GCGATGATGA AGCTGGGTGT CGAGAACGAT ATCGCCCTGC TGAATTATCT CTCTTCAGTG
ACGTTAAGTC CGGCAGATAA AGACTAA
|
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| Protein sequence | MSRACCSKVA YYMNNMNVII ADDHPIVLFG IRKSLEQIEW VNVVGEFEDS TALINNLPKL
DAHVLITDLS MPGDKYGDGI TLIKYIKRHF PSLSIIVLTM NNNPAILSAV LDLDIEGIVL
KQGAPTDLPK ALAALQKGKK FTPESVSRLL EKISAGGYGD KRLSPKESEV LRLFAEGFLV
TEIAKKLNRS IKTISSQKKS AMMKLGVEND IALLNYLSSV TLSPADKD
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