Gene SbBS512_E0706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0706 
Symbol 
ID6269178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp662095 
End bp662598 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content53% 
IMG OID641724896 
ProductIS1 transposase orfB 
Protein accessionYP_001879425 
Protein GI187731929 
COG category[L] Replication, recombination and repair 
COG ID[COG1662] Transposase and inactivated derivatives, IS1 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.60614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCGCC AGTGCACGCA TTATGGGCGT TGGCCTCAAC ACGGTTTTAC GTCACTTAAA 
AAACTCAGGC CGCAGTCGGT AACCTCGCGC ATACAACCGG GCAGTGATGT GATTGTCTGC
GCTGAAATGG ACGAACAGTG GGGCTACGTC GGTGCTAAAT CACGTCAGCG CTGGCTGTTT
TACGCGTATG ACAGGATACG GAGGACGGTT GTGGCGCACG TCTTCGGTGA ACGCACTCTG
GCCACACTGG AGCGTCTTCT GAGCCTGCTG TCGGCCTTTG AGGTCGTGGT ATGGATGACG
GATGGCTGGC CGCTGTATGA ATCACGCCTG AAGGGAAAGC TGCACGTTAT CAGCAAGCGT
TACACTCAGC GCATTGAGCG ACATAATCTG AATCTGAGAC AACATCTGGC AAGGCTGGGA
CGGAAGTCAC TGTCGTTCTC AAAATCGGTG GAGCTGCATG ACAAGGTCAT CGGGCATTAT
CTGAACATAA AACACTATCA GTAA
 
Protein sequence
MSRQCTHYGR WPQHGFTSLK KLRPQSVTSR IQPGSDVIVC AEMDEQWGYV GAKSRQRWLF 
YAYDRIRRTV VAHVFGERTL ATLERLLSLL SAFEVVVWMT DGWPLYESRL KGKLHVISKR
YTQRIERHNL NLRQHLARLG RKSLSFSKSV ELHDKVIGHY LNIKHYQ