Gene SbBS512_E0688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0688 
Symbol 
ID6272271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp652951 
End bp653637 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content47% 
IMG OID641724884 
Productphage integrase 
Protein accessionYP_001879417 
Protein GI187731225 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000188097 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGTTACC CCCAAACGAA TCGGAAAATC GATACTGGAA AAACTCTAAC TCGGTGGCCA 
GTTTTTGTTG ACCACTTCAC AGACATTTTT AAAACAGCTA TAGCTTCTGG TCTTGCCGAA 
GAAGATCCAG CTTCTGCAAC CAGGCCATTC AGAACTGAAG TGAAGCGCAG TCGACTGTTA 
ATTGACGAGT ATCTGTTAAT CAGGAAAATA GCAGACGTCC AGAACGAATG GTTCGGCCTT 
TGCATGGATC TTGCACTGGT AACAGGACAG CGCGAAGGAG ATCTGGCGGC TATGAGATGG 
GAGGATATAA GAGATGGCAG GCTATACGTG GAACAACAAA AAACAGGGGC AAAAATTCGC 
ATTTCTCTCC CCACCACGAT TTCCAGATTG AATTTAACAC TTACCGATGT ACTGGATAAC 
TTGAAAAAAA TAAACGGTAA AAACGAAAAG TTACTCGGAG GGAAGACAGC CAGGACAATC 
GCAGCACAGT TCAGGATTGC CCGAGACACA TCCGGATTGA AATGGGAAGG TGACCCACCG 
CCATTTCATG AAATCCGAAG TTTATCCGGT CGCCTGCACT CAGCAGAAAA AGGCAGTGAT 
TTCACTCAGG CGCTCCTTGG ACATCGTTCA TCCAGCATGA CGGATAAATA CCGTGACGGA 
CGAGGGAGGG AATGGAAAGA CATTTAG
 
Protein sequence
MGYPQTNRKI DTGKTLTRWP VFVDHFTDIF KTAIASGLAE EDPASATRPF RTEVKRSRLL 
IDEYLLIRKI ADVQNEWFGL CMDLALVTGQ REGDLAAMRW EDIRDGRLYV EQQKTGAKIR 
ISLPTTISRL NLTLTDVLDN LKKINGKNEK LLGGKTARTI AAQFRIARDT SGLKWEGDPP 
PFHEIRSLSG RLHSAEKGSD FTQALLGHRS SSMTDKYRDG RGREWKDI