| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0687 |
|---|
| Symbol | ybhA |
|---|
| ID | 6273092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 651897 |
|---|
| End bp | 652715 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641724883 |
|---|
| Product | phosphotransferase |
|---|
| Protein accession | YP_001879416 |
|---|
| Protein GI | 187732160 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.028657 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAC GCGTGATTGC TCTCGACTTA GACGGCACCT TATTGACCCC GAAAAAGACC
CTGCTTCCTT CATCGATAGA AGCCCTGGCC CGCGCTCGCG AAGCAGGCTA TCAATTAATC
ATCATCACAG GTCGCCATCA CGTCGCTATT CATCCTTTTT ATCAGGCGCT GGCGCTGGAT
ACACCTGCTA TTTGCTGTAA TGGCACCTAT TTGTATGATT ATCATGCAAA AACCGTGCTG
GAAGCGGACC CAATGCCCGT TAATAAAGCC CTGCAACTCA TTGAGATGCT GAATGAACAC
CACATTCACG GTCTGATGTA TGTGGATGAT GCAATGGTCT ATGAGCACCC GACCGGGCAT
GTCATTCGCA CGTCTAACTG GGCGCAAACC CTGCCGCCGG AACAGCGTCC GACTTTCACA
CAAGTCGCTT CTCTGGCTGA AACGGCGCAA CAAGTTAACG CCGTATGGAA GTTCGCCCTG
ACGCACGATG ACATGCCGCA ATTGCAGCAT TTTGGTAAGC ATGTCGAACA TGAACTGGGA
CTGGAGTGTG AATGGTCCTG GCACGATCAG GTTGATATTG CACGCGGCGG CAACAGCAAA
GGTAAACGTT TGACGAAATG GGTTGAGGCG CAAGGCTGGT CGATGGAAAA CGTCGTGGCG
TTCGGCGATA ACTTTAATGA TATCAGTATG CTGGAGGCCG CTGGTACAGG CGTGGCGATG
GGCAACGCCG ATGACGCGGT AAAAGCGCGC GCCAACATTG TGATTGGTGA TAACACCACC
GACAGCATTG CCCAGTTCAT TTATAGCCAC CTGATTTAA
|
|---|
| Protein sequence | MTTRVIALDL DGTLLTPKKT LLPSSIEALA RAREAGYQLI IITGRHHVAI HPFYQALALD
TPAICCNGTY LYDYHAKTVL EADPMPVNKA LQLIEMLNEH HIHGLMYVDD AMVYEHPTGH
VIRTSNWAQT LPPEQRPTFT QVASLAETAQ QVNAVWKFAL THDDMPQLQH FGKHVEHELG
LECEWSWHDQ VDIARGGNSK GKRLTKWVEA QGWSMENVVA FGDNFNDISM LEAAGTGVAM
GNADDAVKAR ANIVIGDNTT DSIAQFIYSH LI
|
|---|
| |