| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0673 |
|---|
| Symbol | pnuC |
|---|
| ID | 6270408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 637466 |
|---|
| End bp | 638170 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641724868 |
|---|
| Product | nicotinamide mononucleotide transporter PnuC |
|---|
| Protein accession | YP_001879401 |
|---|
| Protein GI | 187731340 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG3201] Nicotinamide mononucleotide transporter |
|---|
| TIGRFAM ID | [TIGR01528] nicotinamide mononucleotide transporter PnuC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0000252701 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGAATA TCCTGGTACA TATACCAATA GGAGCAGGCG GTTATGATCT CTCATGGATC
GAAGCGGTAG GCACGATCGC CGGGTTGCTG TGTATTGGCC TTGCCAGTCT GGAGAAGATC
AGCAACTACT TCTTTGGCCT GATCAACGTC ACCTTGTTTG GCATTATTTT CTTTCAGATT
CAGCTGTATG CCAGCCTGCT ATTACAGGTG TTTTTCTTTG CCGCGAATAT TTACGGTTGG
TATGCGTGGT CGCGACAAAC CAGTCAGAAC GAGGCGGAGT TGAAAATTCG CTGGTTACCA
TTGCCGAAGG CGCTCAGCTG GTTGGCGGTT TGCGTTGTTT CGATTGGTCT GATGACGGTA
TTTATCAATC CGGTGTTTGC ATTTTTGACC CGCGTGGCAG TCATGATCAT GCAAGCATTA
GGATTACAGG TTGTGATGCC TGAACTGCAA CCGGACGCTT TCCCGTTCTG GGATTCATGC
ATGATGGTGT TATCTATCGT GGCAATGCTT CTGATGACGC GTAAGTATGT GGAAAACTGG
CTGTTGTGGG TGATTATTAA CGTGATTAGC GTCGTTATTT TTGCACTTCA GGGCGTTTAC
GCCATGTCTC TGGAGTACAT CATCCTGACC TTTATTGCGC TCAACGGCAG TCGGATGTGG
ATCAACAGCG CACGTGAAAG AGGCTCATGC GCGCTGTCCC ATTAA
|
|---|
| Protein sequence | MQNILVHIPI GAGGYDLSWI EAVGTIAGLL CIGLASLEKI SNYFFGLINV TLFGIIFFQI
QLYASLLLQV FFFAANIYGW YAWSRQTSQN EAELKIRWLP LPKALSWLAV CVVSIGLMTV
FINPVFAFLT RVAVMIMQAL GLQVVMPELQ PDAFPFWDSC MMVLSIVAML LMTRKYVENW
LLWVIINVIS VVIFALQGVY AMSLEYIILT FIALNGSRMW INSARERGSC ALSH
|
|---|
| |