Gene SbBS512_E0660 details

Gene Information

• Locus tag: SbBS512_E0660
• Symbol: tolR
• ID: 6268984
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 630704
• End bp: 631132
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641724856
• Product: colicin uptake protein TolR
• Protein accession: YP_001879395
• Protein GI: 187734066
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0848] Biopolymer transport protein
• TIGRFAM ID: [TIGR02801] TolR protein

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000000000013266
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAGAG CGCGTGGACG AGGTCGTCGC GAACTTAAGT CCGAAATCAA CATTGTACCG 
TTGCTGGACG TACTGCTGGT GCTGTTGCTG ATCTTCATGG CGACAGCGAC CATCATCACC 
CAGAGCGTGG AGGTCGATCT GCCAGACGCT ACTGAATCAC AGGCGGTGAG CAGTAACGAT 
AATCCGCCAG TGATTGTTGA AGTGTCTGGT ATTGGTCAGT ACACCGTGGT GGTTGAGAAA 
GATCGCCTGG AGCGTTTACC ACCAGAGCAG GTGGTGGCGG AAGTGTCCAG CCGTTTCAAG 
GCCAACCCGA AAACGGTCTT TCTGATCGGT GGCGCAAAAG ATGTGCCTTA CGATGAAATA 
ATTAAAGCAC TGAACTTGTT ACATAGTGCG GGTGTGAAAT CGGTTGGTTT AATGACGCAG 
CCTATCTAA 

 

Protein sequence

MARARGRGRR ELKSEINIVP LLDVLLVLLL IFMATATIIT QSVEVDLPDA TESQAVSSND 
NPPVIVEVSG IGQYTVVVEK DRLERLPPEQ VVAEVSSRFK ANPKTVFLIG GAKDVPYDEI 
IKALNLLHSA GVKSVGLMTQ PI