Gene SbBS512_E0658 details

Gene Information

• Locus tag: SbBS512_E0658
• Symbol: ybgC
• ID: 6268442
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 629607
• End bp: 630011
• Gene Length: 405 bp
• Protein Length: 134 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 641724854
• Product: acyl-CoA thioester hydrolase YbgC
• Protein accession: YP_001879393
• Protein GI: 187730719
• COG category: [R] General function prediction only
• COG ID: [COG0824] Predicted thioesterase
• TIGRFAM ID: [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family; [TIGR02799] tol-pal system-associated acyl-CoA thioesterase

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000000000013537
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATACAA CGCTGTTTCG ATGGCTGGTT CGCGTCTACT ATGAAGATAC CGATGCCGGT 
GGTGTGGTGT ACCACGCCAG TTACGTCGCT TTTTATGAAA GAGCACGCAC AGAGATGCTG 
CGTCATCATC ACTTCAGTCA GCAGGCGCTG ATGGCTGAAC GCGTTGCCTT TGTGGTACGT 
AAAATGACGG TGGAATATTA CGCACCTGCG CGGCTCGACG ATATGCTCGA AATACAGACT 
GAAATAACAT CAATGCGTGG CACCTCTTTG GTTTTCACGC AACGTATTGT CAACGCCGAG 
AATACTTTGC TGAATGAAGC AGAGGTTCTG GTTGTTTGCG TTGACCCACT CAAAATGAAG 
CCTCGTGCGC TTCCCAAGTC TATTGTCGCG GAGTTTAAGC AGTGA 

 

Protein sequence

MNTTLFRWLV RVYYEDTDAG GVVYHASYVA FYERARTEML RHHHFSQQAL MAERVAFVVR 
KMTVEYYAPA RLDDMLEIQT EITSMRGTSL VFTQRIVNAE NTLLNEAEVL VVCVDPLKMK 
PRALPKSIVA EFKQ