| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0655 |
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| Symbol | cydB1 |
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| ID | 6271990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 627897 |
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| End bp | 629036 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641724851 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_001879390 |
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| Protein GI | 187731462 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000247191 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGATT ATGAAGTATT GCGTTTTATC TGGTGGCTGC TGGTTGGCGT TCTGCTGATT
GGTTTTGCAG TCACTGACGG TTTCGACATG GGGGTGGGCA TGCTCACCCG TTTCCTCGGT
CGTAACGACA CCGAGCGTCG AATTATGATT AACTCCATTG CACCACACTG GGACGGTAAC
CAGGTTTGGC TGATCACCGC GGGCGGCGCA CTCTTTGCTG CCTGGCCGAT GGTCTATGCC
GCTGCGTTCT CCGGCTTCTA TGTGGCGATG ATCCTCGTGC TGGCGTCTTT GTTCTTCCGT
CCGGTCGGTT TTGACTACCG CTCCAAGATT GAAGAAACCC GCTGGCGTAA CATGTGGGAC
TGGGGCATCT TCATTGGTAG CTTCGTTCCG CCGCTGGTAA TTGGTGTTGC GTTCGGTAAC
CTGTTGCAGG GCGTACCGTT CAACGTTGAT GAATATCTGC GTCTGTACTA CACCGGTAAC
TTCTTCCAGT TGCTTAACCC GTTCGGCCTG CTGGCAGGCG TGGTGAGCGT AGGGATGATC
ATTACTCAGG GCGCAACCTA TCTGCAAATG CGTACCGTGG GTGAACTGCA CCTGCGTACC
CGTGCAACGG CTCAGGTGGC TGCGCTGGTG ACACTGGTCT GTTTCGCACT GGCTGGCGTA
TGGGTGATGT ACGGTATCGA TGGTTATGTC GTGAAATCGA CAATGGACCA TTACGCAGCC
TCTAACCCAC TGAATAAAGA AGTGGTTCGT GAAGCTGGCG CATGGCTGGT TAACTTCAAC
AACACGCCAA TTCTGTGGGC TATTCCGGCA CTGGGTGTGG TTCTGCCGCT GCTGACCATC
CTGACTGCAC GTATGGATAA AGCCGCGTGG GCGTTTGTGT TCTCCTCCCT GACGCTGGCC
TGCATCATCC TGACAGCCGG TATCGCAATG TTCCCGTTTG TGATGCCGTC CAGCACCATG
ATGAACGCAA GTCTGACAAT GTGGGATGCA ACTTCCAGCC AGCTGACGCT TAACGTCATG
ACCTGGGTTG CGGTGGTTCT GGTACCGATC ATTCTGCTCT ACACCGCCTG GTGTTACTGG
AAAATGTTCG GTCGTATCAC CAAAGAAGAT ATTGAACGTA ACACCCACTC TCTGTACTAA
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| Protein sequence | MIDYEVLRFI WWLLVGVLLI GFAVTDGFDM GVGMLTRFLG RNDTERRIMI NSIAPHWDGN
QVWLITAGGA LFAAWPMVYA AAFSGFYVAM ILVLASLFFR PVGFDYRSKI EETRWRNMWD
WGIFIGSFVP PLVIGVAFGN LLQGVPFNVD EYLRLYYTGN FFQLLNPFGL LAGVVSVGMI
ITQGATYLQM RTVGELHLRT RATAQVAALV TLVCFALAGV WVMYGIDGYV VKSTMDHYAA
SNPLNKEVVR EAGAWLVNFN NTPILWAIPA LGVVLPLLTI LTARMDKAAW AFVFSSLTLA
CIILTAGIAM FPFVMPSSTM MNASLTMWDA TSSQLTLNVM TWVAVVLVPI ILLYTAWCYW
KMFGRITKED IERNTHSLY
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