Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0632 |
Symbol | nei |
ID | 6268897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 601244 |
End bp | 602035 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641724829 |
Product | endonuclease VIII |
Protein accession | YP_001879368 |
Protein GI | 187732849 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGAAG GCCCGGAGAT CCGCCGTGCA GCGGATAACC TGGAGGCGGC GATCAAAGGC AAACCACTAA CTGATGTCTG GTTTGCCTTC CCGCAGTTAA AAACTTATCA ATCACAACTT ATCGGTCAAC ACGTTACCCA TGTGGGAACG CGTGGTAAGG CGTTGTTAAC TCATTTTTCC AACGACTTAA CGCTCTACAG CCATAATCAG CTTTACGGCG TCTGGCGCGT GGTTGATACC GGCGAAGAGC CGCAGACCAC GCGAGTATTG CGGGTAAAAC TGCAAACGGC TGACAAAACC ATTCTGCTTT ATAGCGCCTC GGATATTGAG ATGTTGAGGC CGGAACAACT GACCACGCAT CCGTTTTTAC AACGCGTTGG TCCCGATGTG CTGGATCCGA ATCTGACGCC GGAGGTGGTA AAGGAACGGT TATTGTCACC GCGCTTTCGT AACCGTCAGT TTGCAGGATT ACTGCTCGAT CAGGCGTTTC TGGCTGGGCT TGGCAATTAT TTGCGGGTGG AGATCCTCTG GCAGGTTGGG TTGACTGGAA ATCATAAAGC GAAAGATCTC AATGCGGCGC AACTGGATGC ACTCGCACAC GCGTTACTGG AGATTCCTCG GTTTTCTTAC GCTACGCGGG GGCAGGTGGA TGAGAATAAG CATCATGGGG CGCTGTTTCG CTTTAAGGTT TTTCATCGTG ATGGCGAACT GTGCGAACGC TGTGGCGGCA TCATTGAGAA AACCACGTTG TCCTCGCGCC CGTTTTACTG GTGTCCAGGC TGCCAGCACT AG
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Protein sequence | MPEGPEIRRA ADNLEAAIKG KPLTDVWFAF PQLKTYQSQL IGQHVTHVGT RGKALLTHFS NDLTLYSHNQ LYGVWRVVDT GEEPQTTRVL RVKLQTADKT ILLYSASDIE MLRPEQLTTH PFLQRVGPDV LDPNLTPEVV KERLLSPRFR NRQFAGLLLD QAFLAGLGNY LRVEILWQVG LTGNHKAKDL NAAQLDALAH ALLEIPRFSY ATRGQVDENK HHGALFRFKV FHRDGELCER CGGIIEKTTL SSRPFYWCPG CQH
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