Gene SbBS512_E0616 details

Gene Information

• Locus tag: SbBS512_E0616
• Symbol: mrdA
• ID: 6270985
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 586663
• End bp: 588564
• Gene Length: 1902 bp
• Protein Length: 633 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641724815
• Product: penicillin-binding protein 2
• Protein accession: YP_001879354
• Protein GI: 187733612
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0768] Cell division protein FtsI/penicillin-binding protein 2
• TIGRFAM ID: [TIGR03423] penicillin-binding protein 2

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000000054384
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTAC AGAACTCTTT TCGCGACTAT ACGGCAGAGT CCGCGCTGTT TGTGCGCCGG 
GCGCTGGTCG CCTTTTTGGG GATTTTGCTG CTGACCGGCG TGCTTATCGC CAACCTGTAT 
AATCTGCAAA TTGTTCGCTT TACCGACTAC CAGACCCGCT CTAATGAAAA CCGCATTAAG 
CTGGTGCCTA TCGCGCCCAG CCGCGGCATT ATTTACGACC GTAATGGTAT CCCTCTGGCC 
CTCAACCGCA CTATCTACCA GATAGAAATG ATGCCAGAGA AAGTCGATAA CGTGCAGCAA 
ACGCTGGACG CTTTGCGCAG CGTGGTTGAT CTGACCGATG ACGATATTGC TGCATTCCGA 
AAAGAGCGCG CACGTTCACA CCGTTTCACC TCTATTCCCG TGAAAACTAA CCTGACCGAA 
GTACAAGTAG CTCGCTTTGC CGTCAATCAG TACCGTTTTC CGGGGGTTGA AGTTAAAGGC 
TATAAACGTC GTTACTATCC TTACGGTTCG GCGTTGACCC ACGTCATCGG CTATGTGTCG 
AAAATCAACG ATAAAGACGT CGAACGCCTG AATAATGACG GCAAACTGGC CAACTATGCG 
GCAACGCATG ATATCGGTAA GCTGGGCATT GAGCGTTACT ATGAAGACGT GCTGCACGGT 
CAGACCGGTT ATGAAGAGGT TGAAGTTAAC AACCGTGGGC GTGTTATCCG CCAGTTAAAA 
GAAGTACCAC CGCAAGCCGG ACACGATATT TACCTGACGC TGGATCTCAA ACTCCAGCAA 
TATATTGAAA CGCTGCTGGC GGGTAGCCGC GCAGCTGTGG TAGTCACCGA TCCGCGTACA 
GGTGGGGTGC TGGCGCTGGT TTCCACGCCT AGTTATGACC CAAACTTGTT TGTTGACGGT 
ATCTCCAGCA AAGATTATTC CGCCTTGTTG AACGACCCGA ATACACCGCT GGTGAACCGC 
GCCACACAGG GGGTTTATCC TCCCGCGTCT ACAGTTAAAC CCTATGTGGC GGTTTCGGCA 
TTGAGCGCCG GGGTGATCAC GCGCAATACG ACGCTGTTTG ACCCAGGCTG GTGGCAACTG 
CCAGGTTCGG AAAAACGTTA TCGTGACTGG AAAAAATGGG GCCACGGGCG TCTGAATGTC 
ACAAGATCGC TGGAAGAATC TGCGGATACC TTCTTCTATC AGGTGGCCTA CGATATGGGG 
ATCGATCGCC TCTCCGAATG GATGGGTAAA TTCGGTTATG GTCATTACAC CGGTATCGAC 
CTGGCGGAAG AACGTTCCGG CAACATGCCT ACCCGCGAAT GGAAACAGAA ACGCTTTAAA 
AAACCGTGGT ATCAGGGTGA CACCATTCCG GTTGGTATCG GTCAGGGTTA CTGGACAGCG 
ACCCCAATCC AGATGAGTAA GGCACTGATG ATCCTGATTA ATGACGGTAT CGTGAAGGTT 
CCGCATTTGC TGATGAGCAC CGCCGAAGAC GGCAAACAGG TGCCATGGGT ACAACCGCAT 
GAACCGCCCG TCGGCGATAT TCATTCCGGT TACTGGGAGC TGGCGAAAGA CGGTATGTAC 
GGTGTTGCTA ACCGCCCTAA CGGTACGGCG CATAAATACT TTGCCAGCGC ACCGTACAAA 
ATTGCGGCGA AATCTGGTAC CGCTCAGGTC TTCGGTCTGA AAGCGAACGA AACCTATAAT 
GCGCACAAAA TTGCCGAGCG TTTACGTGAC CACAAACTGA TGACCGCCTT TGCGCCATAC 
AACAATCCGC AAGTGGCTGT CGCCATTATT CTGGAGAACG GCGGCGCGGG TCCGGCGGTT 
GGTACGCTGA TGCGTCAGAT CCTCGACCAC ATTATGCTGG GTGATAACAA CACCGATCTG 
CCTGCGGAAA ATCCAGCGGT TGCCGCAGCG GAGGACCATT AA 

 

Protein sequence

MKLQNSFRDY TAESALFVRR ALVAFLGILL LTGVLIANLY NLQIVRFTDY QTRSNENRIK 
LVPIAPSRGI IYDRNGIPLA LNRTIYQIEM MPEKVDNVQQ TLDALRSVVD LTDDDIAAFR 
KERARSHRFT SIPVKTNLTE VQVARFAVNQ YRFPGVEVKG YKRRYYPYGS ALTHVIGYVS 
KINDKDVERL NNDGKLANYA ATHDIGKLGI ERYYEDVLHG QTGYEEVEVN NRGRVIRQLK 
EVPPQAGHDI YLTLDLKLQQ YIETLLAGSR AAVVVTDPRT GGVLALVSTP SYDPNLFVDG 
ISSKDYSALL NDPNTPLVNR ATQGVYPPAS TVKPYVAVSA LSAGVITRNT TLFDPGWWQL 
PGSEKRYRDW KKWGHGRLNV TRSLEESADT FFYQVAYDMG IDRLSEWMGK FGYGHYTGID 
LAEERSGNMP TREWKQKRFK KPWYQGDTIP VGIGQGYWTA TPIQMSKALM ILINDGIVKV 
PHLLMSTAED GKQVPWVQPH EPPVGDIHSG YWELAKDGMY GVANRPNGTA HKYFASAPYK 
IAAKSGTAQV FGLKANETYN AHKIAERLRD HKLMTAFAPY NNPQVAVAII LENGGAGPAV 
GTLMRQILDH IMLGDNNTDL PAENPAVAAA EDH