Gene SbBS512_E0615 details

Gene Information

• Locus tag: SbBS512_E0615
• ID: 6269022
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 586165
• End bp: 586632
• Gene Length: 468 bp
• Protein Length: 155 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 641724814
• Product: rRNA large subunit methyltransferase
• Protein accession: YP_001879353
• Protein GI: 187731027
• COG category: [S] Function unknown
• COG ID: [COG1576] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0000000000000121913
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGCTGC AACTTGTCGC CGTGGGAACG AAAATGCCGG ACTGGGTACA AACCGGTTTT 
ACCGAGTACC TGCGTCGTTT TCCGAAAGAT ATGCCCTTCG AGCTGATTGA AATTCCGGCC 
GGAAAACGCG GCAAGAATGC GGACATCAAG CGCATACTCG ACAAAGAGGG TGAGCAGATG 
TTGGCGGCCG CAGGCAAAAA CCGCATTGTC ACCCTCGATA TTCCAGGCAA GCCCTGGGAT 
ACGCCGCAGT TAGCCGCTGA GCTGGAACGC TGGAAGCTGG ATGGTCGCGA CGTCAGTCTA 
CTGATTGGCG GGCCTGAAGG GTTGTCGCCT GCCTGTAAAG CGGCGGCGGA GCAGAGCTGG 
TCGCTGTCGG CGCTTACCCT CCCCCATCCG CTGGTTCGCG TGCTGGTCGC AGAGAGTCTG 
TACCGGGCGT GGAGCATCAC CACCAACCAT CCTTATCACC GTGAGTGA 

 

Protein sequence

MKLQLVAVGT KMPDWVQTGF TEYLRRFPKD MPFELIEIPA GKRGKNADIK RILDKEGEQM 
LAAAGKNRIV TLDIPGKPWD TPQLAAELER WKLDGRDVSL LIGGPEGLSP ACKAAAEQSW 
SLSALTLPHP LVRVLVAESL YRAWSITTNH PYHRE