| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0599 |
|---|
| Symbol | hscC |
|---|
| ID | 6268777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 571296 |
|---|
| End bp | 572966 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641724802 |
|---|
| Product | DnaK family protein HscC |
|---|
| Protein accession | YP_001879341 |
|---|
| Protein GI | 187730863 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0443] Molecular chaperone |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAATG CAGAACTCAC CATTGGTATC GATCTCGGCA CTACCAATAG TTTAATTGCC
GTCTGGAAAG ACGGTGCCGC GCAATTAATT CCAAATAAGT TCGGTGAATA TTTAACACCA
TCCATAATTA GCATGGATGA AAATAATCAT ATTTTAGTCG GAAAACCGGC TGTATCACGG
CGTACTTCGC ATCCGGATAA AACAGCAGCG TTATTTAAAC GCGCAATGGG CAGTAATACC
AACTGGCGGT TAGGCAGCGA CACATTTAAC GCGCCAGAAC TGTCCTCTTT GGTATTACGC
TCATTAAAAG AAGATGCCGA AGAATTTCTG CAACGTCCGA TTAAAGATGT GGTGATCTCC
GTTCCGGCTT ATTTCAGCGA TGAACAACGC AAGCATACCC GTTTAGCTGC GGAGTTAGCC
GGGTTAAATG CGGTACGCTT AATTAATGAA CCCACAGCAG CTGCGATGGC ATATGGCCTG
CATACGCAAC AAAATACCCG CTCGCTGGTT TTTGATCTCG GTGGCGGCAC GTTTGACGTT
ACGGTGCTTG AGTACGCCAC GCCGGTGATT GAAGTTCACG CCTCCGCTGG CGATAGCTTC
CTCGGTGGCG AAGATTTTAC CCATATGCTG GTCGATGAGG TTTTAAAACG CGCGGAAGTT
GCCAGGACCA CGCTTAACGA GAGTGAACTG GCAGCCTTGT ACGCCTGTGT GGAAGCGGCA
AAATGTAGCA ATCAATCGCC ATTGCACATT CGCTGGCAGT ATCAGGAAGA AACGCGGGAA
TGCGAATTTT ACGAGAACGA ACTGGAAGAT TTGTGGTTGC CGCTGCTCAA TCGCTTGCGA
GTGCCGATTG AACAGGCGTT GCGCGATGCG CGTCTGAAGC CGAGTCAAAT CGACAGTCTG
GTACTGGTTG GCGGCGCGTC ACAAATGCCG CTGGTGCAGC GAATCGCCGT GCGTCTGTTT
GGCAAATTAC CGTATCAAAG TTACGATCCG AGCACCATTG TCGCGCTGGG CGCAGCAATC
CAGGCCGCCT GCCGCTTACG CAGTGAAGAT ATTGAAGAGG TAATCCTCAC TGATATTTGC
CCTTACTCGT TGGGCGTTGA AGTTAACCGC CAGGGCGTTT CCGGCATTTT CTCGCCGATT
ATTGAACGAA ACACCACAGT ACCGGTGTCG CGTGTAGAAA CTTACTCGAC CATGCACCCG
GAGCAGGATT CAATTACGGT TAACGTCTAT CAGGGAGAAA ACCACAAAGT TAAAAATAAC
ATTCTGGTTG AATCCTTCGA TGTGCCGTTG AAGAAAACCG GGGCTTATCA GTCGATTGAT
ATTCGCTTTA GTTATGATAT CAACGGGTTG CTTGAAGTTG ACGTGCTTCT GGAAGACGGC
AGCGTTAAGT CCAGAGTGAT TAACCACAGC CCGGTAACAT TGAGCGCGCA GCAGATTGAA
GAGAGTCGGA CGCGGTTATC CGCATTGAAA ATTTATCCGC GCGATATGCT CATCAATCGC
ACCTTTAAAG CCAAACTGGA AGAGTTGTGG GCGCGAGCGC TGGGTGACGA GCGAGAAGAG
ATTGGCCGGG TGATCACCGA TTTTGATGCG GCGCTACAGT CAAACGACAT GGCCCGCGTG
GATGAAGTTC GGCGGCGGGC GAGCGATTAT TTAGCCATTG AGATCCCATA A
|
|---|
| Protein sequence | MDNAELTIGI DLGTTNSLIA VWKDGAAQLI PNKFGEYLTP SIISMDENNH ILVGKPAVSR
RTSHPDKTAA LFKRAMGSNT NWRLGSDTFN APELSSLVLR SLKEDAEEFL QRPIKDVVIS
VPAYFSDEQR KHTRLAAELA GLNAVRLINE PTAAAMAYGL HTQQNTRSLV FDLGGGTFDV
TVLEYATPVI EVHASAGDSF LGGEDFTHML VDEVLKRAEV ARTTLNESEL AALYACVEAA
KCSNQSPLHI RWQYQEETRE CEFYENELED LWLPLLNRLR VPIEQALRDA RLKPSQIDSL
VLVGGASQMP LVQRIAVRLF GKLPYQSYDP STIVALGAAI QAACRLRSED IEEVILTDIC
PYSLGVEVNR QGVSGIFSPI IERNTTVPVS RVETYSTMHP EQDSITVNVY QGENHKVKNN
ILVESFDVPL KKTGAYQSID IRFSYDINGL LEVDVLLEDG SVKSRVINHS PVTLSAQQIE
ESRTRLSALK IYPRDMLINR TFKAKLEELW ARALGDEREE IGRVITDFDA ALQSNDMARV
DEVRRRASDY LAIEIP
|
|---|
| |