Gene SbBS512_E0574 details

Gene Information

• Locus tag: SbBS512_E0574
• Symbol: nagA
• ID: 6269957
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 551109
• End bp: 552257
• Gene Length: 1149 bp
• Protein Length: 382 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641724778
• Product: N-acetylglucosamine-6-phosphate deacetylase
• Protein accession: YP_001879325
• Protein GI: 187733720
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1820] N-acetylglucosamine-6-phosphate deacetylase
• TIGRFAM ID: [TIGR00221] N-acetylglucosamine-6-phosphate deacetylase

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 0.731275
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATGCAT TAACCCAGGG CCGGATCTTT ACCGGCCACG AATTTCTTGA TGACCACGCG 
GTTGTTATCG CTGATGGCCT GATTAAAAGC GTCTGTCCGG TAGCGGAACT GCCGCCAGAG 
ATCGAACAAC GTTCACTGAA CGGGGCCATT CTCTCCCCCG GTTTTATCGA TGTGCAGTTA 
AACGGCTGCG GCGGCGTACA GTTTAACGAC ACCGCTGAAG CGGTCAGCGT GGAAACGCTG 
GAAATCATGC AGAAAGCCAA TGAGAAATCA GGCTGTACTA ACTATCTGCC GACGCTTATC 
ACCACCAGCG ATGAGCTGAT GAAACAGGGC GTGCGCGTTA TGCGCGAGTA CCTGGCAAGA 
CATCCGAATC AGGCGTTAGG TCTGCATCTG GAAGGTCCGT GGCTGAATCT GGTAAAAAAA 
GGCACCCATA ATCCGAATTT TGTGCGTAAG CCTGATGCCG CGCTGGTCGA TTTCCTGTGT 
GAAAACGCCG ACGTCATTAC CAAAGTGACC CTGGCACCGG AAATGGTTCC TGCGGAAGTC 
ATCAGCAAAC TGGCAAATGC CGGGATTGTG GTTTCTGCCG GTCACTCCAA CGCGACGTTG 
AAAGAAGCGA AAGCCGGTTT CCGCGCGGGG ATTACCTTTG CCACCCATCT GTACAACGCG 
ATGCCGTATA TTACCGGTCG TGAACCGGGC CTGGCGGGCG CGATCCTCGA CGAAGCTGAC 
ATTTATTGCG GTATTATCGC TGATGGCCTG CATGTTGATT ACGCCAACAT TCGTAACGCT 
AAACGCCTTA AAGGCGACAA ACTGTGTCTG GTTACCGACG CCACCGCGCC AGCAGGTGCC 
AACATTGAAC AGTTCATTTT TGCGGGTAAA ACAATATACT ACCGTAACGG ACTTTGTGTG 
GATGAGAACG GTACGTTAAG CGGTTCATCC TTAACCATGA TTGAAGGCGT GCGTAATCTG 
GTCGAACATT GCGGTATCGC ACTGGATGAA GTGCTGCGTA TGGCGACGCT CTATCCGGCG 
CGTGCGATTG GCGTTGAGAA ACGTCTCGGC ACACTCGCCG CAGGTAAAGT AGCCAACCTG 
ACCGCATTCA CACCTGATTT TAAAATCACC AAGACCATCG TTAACGGTAA CGAGGTCGTA 
ACTCAATAA 

 

Protein sequence

MYALTQGRIF TGHEFLDDHA VVIADGLIKS VCPVAELPPE IEQRSLNGAI LSPGFIDVQL 
NGCGGVQFND TAEAVSVETL EIMQKANEKS GCTNYLPTLI TTSDELMKQG VRVMREYLAR 
HPNQALGLHL EGPWLNLVKK GTHNPNFVRK PDAALVDFLC ENADVITKVT LAPEMVPAEV 
ISKLANAGIV VSAGHSNATL KEAKAGFRAG ITFATHLYNA MPYITGREPG LAGAILDEAD 
IYCGIIADGL HVDYANIRNA KRLKGDKLCL VTDATAPAGA NIEQFIFAGK TIYYRNGLCV 
DENGTLSGSS LTMIEGVRNL VEHCGIALDE VLRMATLYPA RAIGVEKRLG TLAAGKVANL 
TAFTPDFKIT KTIVNGNEVV TQ