| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0571 |
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| Symbol | nagE |
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| ID | 6272576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 547969 |
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| End bp | 549915 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641724776 |
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| Product | PTS system N-acetyl glucosamine specific transporter subunits IIABC |
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| Protein accession | YP_001879323 |
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| Protein GI | 187730563 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG2190] Phosphotransferase system IIA components |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR00830] PTS system, glucose subfamily, IIA component
[TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component
[TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTT TAGGTTTTTT CCAGCGACTC GGTAGGGCGT TACAGCTCCC TATCGCGGTG
CTGCCGGTGG CGGCACTGTT GCTGCGATTC GGTCAGCCAG ATTTACTTAA CGTTGCGTTT
ATTGCCCAGG CGGGCGGTGC GATTTTTGAT AACCTCGCAT TAATCTTCGC CATCGGTGTG
GCATCCAGCT GGTCGAAAGA CAGCGCAGGT GCGGCGGCGC TGGCGGGTGC GGTAGGTTAC
TTTGTGTTAA CCAAAGCGAT GGTGACCATC AACCCAGAAA TAAACATGGG TGTACTGGCG
GGTATCATTA CCGGTCTGGT TGGTGGCGCA GCCTATAACC GTTGGTCCGA TATTAAACTG
CCGGACTTCC TGAGCTTCTT CGGCGGCAAA CGCTTTGTGC CGATTGCCAC CGGCTTCTTC
TGCCTGGTGC TGGCGGCCAT TTTTGGTTAC GTCTGGCCGC CGGTACAGCA CGCTATCCAT
GCAGGAGGCG AGTGGATCGT TTCTGCGGGC GCGCTGGGTT CCGGTATCTT TGGTTTCATC
AACCGTCTGC TGATCCCAAC CGGTCTGCAT CAGGTGCTGA ACACCATCGC CTGGTTCCAG
ATTGGTGAAT TCACCAACGC GGCGGGTACG GTTTTCCACG GTGATATCAA CCGCTTCTAT
GCCGGTGACG GCACCGCGGG GATGTTCATG TCCGGCTTCT TCCCGATTAT GATGTTCGGT
CTGCCGGGTG CGGCGCTGGC GATGTACTTC GCAGCACCGA AAGAGCGTCG TCCGATGGTT
GGCGGGATGC TGCTTTCTGT TGCTGTTACT GCGTTCCTGA CCGGTGTGAC TGAGCCGCTG
GAATTCCTGT TCATGTTCCT TGCACCGCTG CTGTACCTCC TGCACGCACT GCTGACCGGT
ATCAGCCTGT TTGTGGCAAC ACTGCTGGGT ATCCATGCTG GCTTCTCTTT CTCTGCGGGG
GCTATCGACT ACGCGTTGAT GTATAATCTG CCGGCCGCCA GCCAGAACGT CTGGATGCTG
CTGGTGATGG GTGTTGTCTT CTTCGCTATC TACTTCGTGG TGTTCAGTTT GGTTATCCGC
ATGTTCAACC TGAAAACGCC GGGTCGTGAA GATAAAGAAG ACGAGATCGT TACTGAAGAA
GCCAACAGCA ACACTGAAGA AGGCCTCAAT CAACTGGCGA CCAACTATAT TGCTGCGGTT
GGTGGCACTG ACAACCTGAA AGCAATTGAC GCCTGTATCA CCCGTCTGCG CCTGACCGTG
GCTGACTCTG CCCGCGTCAA CGATACGATG TGTAAACGTC TGGGTGCTTC TGGTGTAGTG
AAACTGAACA AACAGACTAT TCAGGTGATT GTTGGCGCGA AAGCAGAATC CATCGGCGAT
GCGATGAAGA AAGTCGTTGC CCGTGGTCCG GTAGCCGCTG CGTCAGCTGA AGAAACTCCG
TCAACTGCCG CGCCTGTAGC AAAACCGCAG GCTGTACCAA ACGCGGTATC TATCGCGGAG
CTGGTATCGC CGATTACCGG TGATGTCGTG GCACTGGATC AGGTTCCTGA CGAAGCATTC
GCCAGCAAAG CGGTGGGTGA CGGTGTGGCG GTGAAACCGA CAGATAAAAT CGTCGTATCA
CCAGCCGCAG GGACAATCGT GAAAATCTTC AACACCAACC ACGCGTTCTG CCTGGAAACC
GAAAAAGGCG CGGAGATCGT CGTCCATATG GGTATCGACA CCGTAGCGCT GGAAGGTAAA
GGCTTTAAAC GTCTGGTGGA AGAGGGTGCG CAGGTAAGCG CAGGGCAACC GATTCTGGAA
ATGGATCTGG ATTACCTGAA CGCTAACGCC CGCTCGATGA TTAGCCCGGT GGTTTGCAGC
AATATCGACG ATTTCAGTGG CTTGATCATT AAAGCTCAGG GCCATGTTGT GGCGGGTCAA
ACACCGCTGT ATGAAATCAA AAAGTAA
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| Protein sequence | MNILGFFQRL GRALQLPIAV LPVAALLLRF GQPDLLNVAF IAQAGGAIFD NLALIFAIGV
ASSWSKDSAG AAALAGAVGY FVLTKAMVTI NPEINMGVLA GIITGLVGGA AYNRWSDIKL
PDFLSFFGGK RFVPIATGFF CLVLAAIFGY VWPPVQHAIH AGGEWIVSAG ALGSGIFGFI
NRLLIPTGLH QVLNTIAWFQ IGEFTNAAGT VFHGDINRFY AGDGTAGMFM SGFFPIMMFG
LPGAALAMYF AAPKERRPMV GGMLLSVAVT AFLTGVTEPL EFLFMFLAPL LYLLHALLTG
ISLFVATLLG IHAGFSFSAG AIDYALMYNL PAASQNVWML LVMGVVFFAI YFVVFSLVIR
MFNLKTPGRE DKEDEIVTEE ANSNTEEGLN QLATNYIAAV GGTDNLKAID ACITRLRLTV
ADSARVNDTM CKRLGASGVV KLNKQTIQVI VGAKAESIGD AMKKVVARGP VAAASAEETP
STAAPVAKPQ AVPNAVSIAE LVSPITGDVV ALDQVPDEAF ASKAVGDGVA VKPTDKIVVS
PAAGTIVKIF NTNHAFCLET EKGAEIVVHM GIDTVALEGK GFKRLVEEGA QVSAGQPILE
MDLDYLNANA RSMISPVVCS NIDDFSGLII KAQGHVVAGQ TPLYEIKK
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