| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0555 |
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| Symbol | kdpE |
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| ID | 6272496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 534637 |
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| End bp | 535314 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641724760 |
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| Product | DNA-binding transcriptional activator KdpE |
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| Protein accession | YP_001879307 |
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| Protein GI | 187730233 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACAAACG TTCTGATTGT TGAAGATGAA CAGGCTATTC GTCGCTTTCT GCGCACGGCG
CTGGAGGGCG ACGGGATGCG CGTCTATGAG GCCGAAACGC TGCAACGCGG CTTGCTGGAA
GCGGCTACCC GTAAGCCAGA TTTGATTATT CTCGATCTCG GCCTGCCCGA TGGTGATGGG
ATTGAGTTTA TCCGCGACCT GCGCCAGTGG AGCGCGGTGC CGGTGATTGT GCTTTCCGCA
CGCAGCGAAG AGAGCGACAA AATCGCCGCG CTGGATGCCG GAGCGGATGA TTATCTGAGT
AAGCCGTTTG GCATTGGCGA ATTGCAGGCC CGTCTGCGCG TCGCTTTACG CCGCCACTCC
GCCACCGCCG CGCCCGATCC GCTGGTGAAA TATTCCGATG TTACCGTCGA TTTAGCCGCC
CGCGTGATTC ACCGGGGTGA GGAAGAGGTG CATCTCACAC CAATTGAGTT CCACCTGCTG
GCGGTGCTGC TCAACAATGC CGGAAAAGTA CTCACCCAGC GCCAGCTCCT TAACCAGGTG
TGGGGGCCAA ACGCGGTCGA ACACAGTCAC TATTTGCGTA TTTATATGGG ACATCTGCGA
CAAAAACTGG AACAGGATCC CGCCCGCCCA CGCCATTTCA TTACTGAAAC CAGTATTGGC
TATCGGTTTA TGCTTTGA
|
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| Protein sequence | MTNVLIVEDE QAIRRFLRTA LEGDGMRVYE AETLQRGLLE AATRKPDLII LDLGLPDGDG
IEFIRDLRQW SAVPVIVLSA RSEESDKIAA LDAGADDYLS KPFGIGELQA RLRVALRRHS
ATAAPDPLVK YSDVTVDLAA RVIHRGEEEV HLTPIEFHLL AVLLNNAGKV LTQRQLLNQV
WGPNAVEHSH YLRIYMGHLR QKLEQDPARP RHFITETSIG YRFML
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