Gene SbBS512_E0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0540 
Symbol 
ID6271067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp517062 
End bp517850 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content54% 
IMG OID641724748 
Producthydrolase, carbon-nitrogen family 
Protein accessionYP_001879295 
Protein GI187733191 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGTTG CTGCAGGACA GTTTGCTGTT ACATCTGTGT GGGAAAAGAA CGCTGAGATT 
TGTGCCTCGT TGATGGCGCA GGCGGCGGAA AACGACGTAT CGCTGTTTGT CCTGCCGGAA
GCATTGCTGG CACGCGATGA TCATGATGCA GATCTATCGG TTAAATCAGC ACAGCTGCTG
GAAGGCGAAT TCCTCGGACG TTTACGGCGA GAAAGTAAAC GTAACATGAT GACGACAATT
CTGACGATTC ATGTTCCTTC AACGCCGGGG CGCGCATGGA ATATGCTGGT GGCACTTCAG
GCAGGAAACA TCGTCGCCCG TTATGCCAAA CTGTATCTCT ATGATGCATT TGCCATTCAG
GAATCACGCC GTGTTGATGC TGGTAATGAA ATCGCTCCGT TACTGGAGGT GGAAGGGATG
AAGGTCGGTC TGATGACCTG TTATGACTTA CGCTTTCCAG AGCTGGCGCT GGCACAGGCA
TTACAGGGAG CTGAAATCCT GGTACTTCCT GCCGCCTGGG TTCGCGGGCC GCTCAAAGAG
CATCACTGGT CAACGTTGCT TGCCGCTCGT GCGCTGGATA CCACCTGTTA TATGGTGGCG
GCGGGCGAGT GCGGGAACAA AAATATCGGG CAAAGCCGGA TTATAGATCC CTTTGGCGTC
ACCATTGCGG CAGCGTCAGA AATGCCTGCA CTCATTATGG CGGAAGTGAC GCCCGAACGT
GTGCGTCAGG TGCGCGCGCA ACTGCCCGTC TTAAACAACC GTCGCTTTGC GCCGCCGCAA
TTATTATGA
 
Protein sequence
MLVAAGQFAV TSVWEKNAEI CASLMAQAAE NDVSLFVLPE ALLARDDHDA DLSVKSAQLL 
EGEFLGRLRR ESKRNMMTTI LTIHVPSTPG RAWNMLVALQ AGNIVARYAK LYLYDAFAIQ
ESRRVDAGNE IAPLLEVEGM KVGLMTCYDL RFPELALAQA LQGAEILVLP AAWVRGPLKE
HHWSTLLAAR ALDTTCYMVA AGECGNKNIG QSRIIDPFGV TIAAASEMPA LIMAEVTPER
VRQVRAQLPV LNNRRFAPPQ LL