Gene SbBS512_E0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0530 
SymbolcitE 
ID6269081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp507834 
End bp508742 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content57% 
IMG OID641724740 
Productcitrate (pro-3S)-lyase, beta subunit 
Protein accessionYP_001879287 
Protein GI187732779 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID[TIGR01588] citrate lyase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCCG CTTCGCTGCA ACAACGTAAA ACTCGCACCC GCCGCAGCAT GTTGTTTGTG 
CCTGGTGCCA ATGCCGCGAT GGTCAGCAAC TCCTTCATCT ACCCGGCTGA TGCCCTGATG
TTTGACCTCG AAGACTCCGT GGCATTACGT GAAAAAGACA CCGCCCGCCG CATGGTTTAT
CACGCGCTGC AACATCCGCT GTATCGCGAT ATTGAAACCA TTGTGCGTGT CAACGCGCTG
GATTCCGAAT GGGGTGTTAA CGACCTGGAA GCCGTCGTTC GCGGTGGTGC GGACGTTGTG
CGTCTGCCGA AAACCGATAC CGCTCAGGAT GTTCTGGATA TTGAAAAAGA GATCCTGCGT
ATCGAAAAAG CCTGTGGTCG TGAACCCGGC AGCACCGGCC TGCTGGCGGC GATTGAATCT
CCGCTGGGCA TTACCCGCGC AGTGGAAATC GCTCACGCTT CCGAGCGTTT GATCGGTATC
GCCCTAGGTG CAGAAGACTA TGTGCGCAAC CTGCGTACAG AACGCTCCCC GGAAGGAACT
GAACTGCTGT TCGCACGCTG TTCCATTTTG CAGGCCGCGC GCTCTGCGGG TATTCAGGCG
TTCGATACCG TCTATTCCGA CGCTAACAAC GAAGCCGGAT TCCTGCAAGA AGCCGCCCAC
ATCAAACAGC TGGGCTTTGA CGGCAAATCG CTGATCAACC CGCGTCAGAT TGATCTGCTG
CACAACCTCT ACGCACCGAC CCAGAAAGAA GTGGATCACG CCCGCCGCGT CGTAGAAGCC
GCTGAAGCCG CCGCTCGCGA AGGCCTCGGC GTGGTTTCCC TGAACGGCAA GATGGTGGAC
GGTCCGGTTA TCGATCGCGC CCGTCTGGTG CTCTCCCGTG CAGAACTTTC CGGCATCCGC
GAAGAATAA
 
Protein sequence
MISASLQQRK TRTRRSMLFV PGANAAMVSN SFIYPADALM FDLEDSVALR EKDTARRMVY 
HALQHPLYRD IETIVRVNAL DSEWGVNDLE AVVRGGADVV RLPKTDTAQD VLDIEKEILR
IEKACGREPG STGLLAAIES PLGITRAVEI AHASERLIGI ALGAEDYVRN LRTERSPEGT
ELLFARCSIL QAARSAGIQA FDTVYSDANN EAGFLQEAAH IKQLGFDGKS LINPRQIDLL
HNLYAPTQKE VDHARRVVEA AEAAAREGLG VVSLNGKMVD GPVIDRARLV LSRAELSGIR
EE