| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0476 |
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| Symbol | ybdK |
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| ID | 6271587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 459992 |
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| End bp | 460975 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641724694 |
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| Product | carboxylate-amine ligase |
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| Protein accession | YP_001879241 |
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| Protein GI | 187732003 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2170] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02050] uncharacterized enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTAC CCGATTTTCA TGTTTCTGAA CCTTTTACAC TCGGTATTGA ACTGGAAATG
CAGGTGGTTA ATCCGCCGGG CTATGACTTA AGCCAGGACT CTTCAATACT GATTGACGCG
GTTAAAAATA AGATCACGGC CGGAGAGGTA AAGCACGATA TCACCGAAAG TATGCTGGAG
CTGGCGACGG ATGTTTGCCG TGATATCAAC CAGGCTGCCG GGCAATTTTC AGCGATGCAG
AAAGTCGTAT TGCAGGCAGC CGCAGACCAT CATCTGGAAA TTTGCGGCGG TGGCACACAC
CCGTTTCAGA AATGGCAGCG ACAGGAGGTA TGCGATAACG AGCGCTATCA ACGAACGCTG
GAAAACTTTG GTTATCTCAT TCAACAGGCG ACCGTTTTTG GTCAGCATGT TCATGTTGGC
TGCGCCAGTG GCGATGACGC CATTTATTTG CTGCACGGCC TGTCACGGTT TGTGCCGCAC
TTCATCGCCC TTTCCGCCGC GTCGCCATAT ATGCAAGGAA CGGATACGCG TTTTGCCTCC
TCACGACCGA ATATTTTTTC CGCCTTTCCT GATAATGGTC CGATGCCGTG GGTCAGTAAC
TGGCAACAAT TTGAAGCCCT GTTTCGCTGT CTGAGTTACA CCACGATGAT CGACAGCATT
AAAGATCTGC ACTGGGATAT TCGCCCCAGT CCTCATTTTG GCACGGTGGA GGTTCGGGTG
ATGGATACCC CGTTAACCCT TAGCCACGCG GTAAATATGG CGGGATTAAT TCAGGCTACC
GCCCACTGGT TACTGACAGA ACGCCCGTTC AAACATCAGG AGAAAGATTA CCTGCTGTAT
AAATTCAACC GTTTCCAGGA CTGTCGCTAT GGGCTGGAAG GCGTCATTAC CGATCCGCAC
ACTGGCGATC GTCGACCGCT AACGGAAGAC ACCTTGCGAT TGCTGGAAAA AATCGCCCCT
TCCGCACTAA TGCCGATCAG TTAA
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| Protein sequence | MPLPDFHVSE PFTLGIELEM QVVNPPGYDL SQDSSILIDA VKNKITAGEV KHDITESMLE
LATDVCRDIN QAAGQFSAMQ KVVLQAAADH HLEICGGGTH PFQKWQRQEV CDNERYQRTL
ENFGYLIQQA TVFGQHVHVG CASGDDAIYL LHGLSRFVPH FIALSAASPY MQGTDTRFAS
SRPNIFSAFP DNGPMPWVSN WQQFEALFRC LSYTTMIDSI KDLHWDIRPS PHFGTVEVRV
MDTPLTLSHA VNMAGLIQAT AHWLLTERPF KHQEKDYLLY KFNRFQDCRY GLEGVITDPH
TGDRRPLTED TLRLLEKIAP SALMPIS
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