| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0450 |
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| Symbol | lpxH |
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| ID | 6269659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 438724 |
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| End bp | 439446 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641724675 |
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| Product | UDP-2,3-diacylglucosamine hydrolase |
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| Protein accession | YP_001879223 |
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| Protein GI | 187733295 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01854] UDP-2,3-diacylglucosamine hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000000427615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCGACAC TCTTTATTGC AGATCTTCAT CTCTGCGTGG AAGAACCGGC GATCACCGCC
GGTTTTCTGC GTTTTTTAGC GGGGGAAGCT CGCAAGGCCG ACGCGCTGTA TATTCTTGGC
GATCTGTTTG AAGCGTGGAT TGGCGACGAC GATCCCAATC CACTCCATCG CCAGATGGCG
GCAGCGATCA AAGCGGTGTC CGATTCCGGC GTTCCCTGTT ATTTCATTCA TGGCAACCGT
GATTTTCTGC TCGGCAAACG CTTTGCCCGT GAAAGTGGCA TGACGTTATT GCCGGAAGAA
AAGGTGCTCG AACTTTATGG CCGCCGGGTG TTGATTATGC ATGGCGACAC GCTGTGCACC
GATGACGCGG GTTATCAGGC TTTTCGCGCC AAAGTCCACA AACCCTGGCT GCAAATGCTA
TTCCTCGCCC TGCCGTTGTT TGTGCGCAAA CGCATTGCCG CGCGAATGCG CGCGAACAGC
AAAGAAGCCA ACAGCAGTAA ATCGCTGGCG ATCATGGACG TTAACCAAAA CGCAGTGGTC
AGTGCGATGG AAAAACATCA GGTGCAATGG CTGATCCACG GGCATACCCA TCGCCCGGCG
GTGCATGAAC TTATCGCCAA CCAGCAACCT GCTTTTCGCG TGGTACTGGG TGCCTGGCAT
ACGGAAGGTT CGATGGTGAA AGTCACGGCG GATGACGTTG AGCTGATTCA TTTTCCGTTT
TAA
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| Protein sequence | MATLFIADLH LCVEEPAITA GFLRFLAGEA RKADALYILG DLFEAWIGDD DPNPLHRQMA
AAIKAVSDSG VPCYFIHGNR DFLLGKRFAR ESGMTLLPEE KVLELYGRRV LIMHGDTLCT
DDAGYQAFRA KVHKPWLQML FLALPLFVRK RIAARMRANS KEANSSKSLA IMDVNQNAVV
SAMEKHQVQW LIHGHTHRPA VHELIANQQP AFRVVLGAWH TEGSMVKVTA DDVELIHFPF
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