Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0441 |
Symbol | gcl |
ID | 6268926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 432133 |
End bp | 433914 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641724666 |
Product | glyoxylate carboligase |
Protein accession | YP_001879214 |
Protein GI | 187732715 |
COG category | [R] General function prediction only |
COG ID | [COG3960] Glyoxylate carboligase |
TIGRFAM ID | [TIGR01504] glyoxylate carboligase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0206883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAA TGAGAGCCGT TGACGCGGCA ATGTATGTGC TGGAGAAAGA AGGTATCACC ACCGCCTTCG GTGTTCCGGG AGCTGCAATC AATCCGTTCT ACTCAGCGAT GCGTAAGCAC GGCGGTATTC GTCACATTCT GGCGCGTCAT GTGGAAGGTG CTTCGCACAT GGCGGAAGGT TATACCCGCG CAACGGCAGG GAATATCGGC GTATGTCTGG GGACTTCCGG TCCTGCGGGC ACGGACATGA TCACCGCGCT CTATTCCGCT TCTGCTGATT CCATTCCTAT TCTGTGCATT ACCGGCCAGG CACCGCGCGC CCGTCTGCAT AAAGAAGATT TTCAGGCCGT AGATATTGAA GCAATTGCTA AACCGGTCAG CAAAATGGCG GTTACAGTTC GTGAAGCGGC GCTGGTGCCT CGCGTGCTGC AACAGGCATT TCACCTGATG CGTTCTGGTC GTCCGGGTCC GGTACTGGTG GATTTACCGT TCGACGTTCA GGTTGCGGAA ATCGAGTTTG ATCCTGACAT GTACGAACCG CTGCCGGTCT ACAAACCTGC TGCCAGCCGT ATGCAGATCG AAAAAGCTGT AGAAATGTTA ATCCAGGCCG AACGTCCGGT GATTGTTGCC GGGGGCGGGG TAATCAATGC TGACGCAGCT GCACTGTTAC AACAGTTTGC TGAACTGACC AGCGTTCCGG TGATCCCAAC GCTGATGGGC TGGGGCTGTA TCCCGGACGA TCATGAACTG ATGGCCGGGA TGGTCGGCCT GCAAACCGCG CATCGTTACG GTAACGCAAC GTTGCTGGCG TCCGACATGG TGTTTGGTAT CGGTAACCGT TTTGCTAACC GTCATACCGG TTCGGTAGAG AAATACACCG AAGGGCGCAA AATCGTTCAT ATCGATATTG AGCCGACGCA AATTGGTCGC GTGCTGTGTC CGGATCTCGG CATTGTCTCT GATGCTAAAG CGGCGCTGAC ACTGCTGGTT GAAGTGGCGC AGGAGATGCA AAAAGCGGGT CGTCTGCCGT GTCGTAAAGA ATGGGTCGCC GACTGCCAGC AGCGCAAACG CACTTTGCTG CGCAAAACCC ACTTCGACAA CGTGCCGGTG AAACCGCAGC GCGTGTATGA AGAGATGAAC AAAGCCTTTG GTCGCGATGT TTGTTATGTC ACCACCATCG GTCTGTCACA AATCGCTGCG GCACAAATGC TGCATGTCTT TAAAGACCGC CACTGGATCA ACTGTGGTCA GGCTGGTCCG TTAGGCTGGA CGATTCCGGC TGCGCTAGGG GTTTGTGCCG CTGATCCGAA ACGCAATGTG GTGGCGATTT CTGGCGACTT TGACTTCCAG TTCCTGATTG AAGAGTTAGC CGTTGGCGCG CAGTTCAACA TTCCGTACAT CCATGTGCTG GTGAATAACG CCTATCTCGG CCTGATTCGT CAGTCACAAC GCGCCTTTGA CATGGACTAC TGCGTGCAAC TCGCTTTCGA GAATATCAAC TCCAGCGAAG TGAACGGTTA CGGCGTCGAC CACGTAAAAG TAGCGGAAGG TTTAGGTTGT AAAGCGATTC GCGTCTTCAA ACCGGAAGAT ATTGCGCCAG CCTTTGAACA GGCGAAAGCC TTAATGGCGC AATATCGGGT ACCGGTAGTC GTGGAAGTTA TTCTCGAGCG TGTGACCAAT ATTTCGATGG GCAGCGAACT GGATAACGTC ATGGAATTTG AAGATATCGC CGATAACGCA GTGGACGCAC CGACTGAAAC CTGCTTCATG CACTATGAAT AA
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Protein sequence | MAKMRAVDAA MYVLEKEGIT TAFGVPGAAI NPFYSAMRKH GGIRHILARH VEGASHMAEG YTRATAGNIG VCLGTSGPAG TDMITALYSA SADSIPILCI TGQAPRARLH KEDFQAVDIE AIAKPVSKMA VTVREAALVP RVLQQAFHLM RSGRPGPVLV DLPFDVQVAE IEFDPDMYEP LPVYKPAASR MQIEKAVEML IQAERPVIVA GGGVINADAA ALLQQFAELT SVPVIPTLMG WGCIPDDHEL MAGMVGLQTA HRYGNATLLA SDMVFGIGNR FANRHTGSVE KYTEGRKIVH IDIEPTQIGR VLCPDLGIVS DAKAALTLLV EVAQEMQKAG RLPCRKEWVA DCQQRKRTLL RKTHFDNVPV KPQRVYEEMN KAFGRDVCYV TTIGLSQIAA AQMLHVFKDR HWINCGQAGP LGWTIPAALG VCAADPKRNV VAISGDFDFQ FLIEELAVGA QFNIPYIHVL VNNAYLGLIR QSQRAFDMDY CVQLAFENIN SSEVNGYGVD HVKVAEGLGC KAIRVFKPED IAPAFEQAKA LMAQYRVPVV VEVILERVTN ISMGSELDNV MEFEDIADNA VDAPTETCFM HYE
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