Gene SbBS512_E0437 details

Gene Information

• Locus tag: SbBS512_E0437
• Symbol: selU
• ID: 6269296
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 428322
• End bp: 429416
• Gene Length: 1095 bp
• Protein Length: 364 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641724662
• Product: tRNA 2-selenouridine synthase
• Protein accession: YP_001879210
• Protein GI: 187731846
• COG category: [R] General function prediction only
• COG ID: [COG2603] Predicted ATPase
• TIGRFAM ID: [TIGR03167] tRNA 2-selenouridine synthase

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.102484
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGAGA GACACACGGA ACAGGACTAT CGTGCCCTGC TGATTGCTGA TACGCCCATT 
ATTGATGTTC GCGCCCCTAT CGAGTTTGAG CAAGGCGCAA TGCCCGCCGC TATCAATCTG 
CCGTTAATGA ATAACGATGA ACGCGCCGCC GTTGGCACCT GCTATAAACA GCAAGGGTCA 
GACGCGGCGC TGGCGCTGGG GCATAAACTG GTGGCGGGTG AAATTCGTCA GCAGCGCATA 
GACGCCTGGC GGGCAGCGTG CCTGCAAAAT CCGCAAGGTA TTCTCTGCTG TGCCCGTGGC 
GGTCAACGCT CACATATTGT GCAAAGCTGG TTGCATGCAG CGGGGATTGA TTATCCGCTG 
GTGGAAGGCG GTTATAAGGC ACTGCGCCAG ACCGCGATTC AGGCGACTAT TGAACTGGCA 
CAAAAACCGA TAGTGCTGAT TGGCGGTTGT ACCGGCAGCG GTAAAACGCT GTTAGTGCAG 
CAACAGCCGA ACGGTGTCGA TCTGGAAGGG CTGGCGCGTC ATCGCGGTTC GGCGTTTGGT 
CGCACGTTAC AACCACAACT TAGCCAGGCG AGTTTTGAAA ATCTGCTGGC TGCCGAAATG 
CTAAAAACCG ACGCCCGTCA GGATTTGCGC CTGTGGGTGC TGGAAGATGA AAGCCGGATG 
ATCGGTTCGA ATCACCTGCC GGAATGTCTG CGCGAGCGAA TGACTCAGGC GGCGATTGCG 
GTGGTAGAAG ATCCGTTTGA GATCCGTCTT GAACGCCTGA ACGAAGAGTA TTTCTTGCGT 
ATGCATCATG ATTTTACCCA CGCGTACGGC GACGAACAGG GCTGGCAGGA ATATTGCGAA 
TACCTGCATC ACGGACTTTC GGCTATTAAG CGTCGGCTGG GGTTACAGCG CTATAACGAA 
CTCGCTGCCC AGCTGGATAC GGCGCTGACA ACGCAACTCA CCACCGGCAG CACCGACGGT 
CATCTGGCCT GGCTGGTGCC GTTACTTAAA GAATATTACG ACCCAATGTA TCGCTATCAG 
CTTGAGAAAA AAGCGGAAAA AGTTGTCTTT CGCGGTGAGT GGGCGGAAGT GGCGGAATGG 
GTTAAGGCGC GGTAA 

 

Protein sequence

MQERHTEQDY RALLIADTPI IDVRAPIEFE QGAMPAAINL PLMNNDERAA VGTCYKQQGS 
DAALALGHKL VAGEIRQQRI DAWRAACLQN PQGILCCARG GQRSHIVQSW LHAAGIDYPL 
VEGGYKALRQ TAIQATIELA QKPIVLIGGC TGSGKTLLVQ QQPNGVDLEG LARHRGSAFG 
RTLQPQLSQA SFENLLAAEM LKTDARQDLR LWVLEDESRM IGSNHLPECL RERMTQAAIA 
VVEDPFEIRL ERLNEEYFLR MHHDFTHAYG DEQGWQEYCE YLHHGLSAIK RRLGLQRYNE 
LAAQLDTALT TQLTTGSTDG HLAWLVPLLK EYYDPMYRYQ LEKKAEKVVF RGEWAEVAEW 
VKAR