Gene SbBS512_E0434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0434 
Symbol 
ID6270003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp425748 
End bp426125 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content53% 
IMG OID641724660 
ProductIS1 transposase orfB 
Protein accessionYP_001879209 
Protein GI187730026 
COG category[L] Replication, recombination and repair 
COG ID[COG1662] Transposase and inactivated derivatives, IS1 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.268817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAAC AGTGGGGATA CGTCGGGGCT AAATCGCGCC AGCGCTGGCT GTTTTACGCG 
TATGACAGGC TCCGGAAGAC GGTTGTTGCG CACGTATTCG GTGAACGCAC TATGGCGACG
CTGGGGCGTC TTATGAGCTT GCTGTCACCC TTTGACGTGG TGATATGGAT GACGGATGGC
TGGCCACTGT ATGAATCCCG CCTGAAGGGA AAGCTGCACG TAATCAGCAA GCGATATACG
CAGCGAATTG AGCGGCATAA CCTGAATCTG AGGCAGCACC TGGCACGGCT GGGACGGAAG
TCGCTGTCGT TCTCAAAATC GGTGGAGCTG CATGACAAAG TCATCGGGCA TTATCTGAAC
ATAAAACACT ATCAATAA
 
Protein sequence
MDEQWGYVGA KSRQRWLFYA YDRLRKTVVA HVFGERTMAT LGRLMSLLSP FDVVIWMTDG 
WPLYESRLKG KLHVISKRYT QRIERHNLNL RQHLARLGRK SLSFSKSVEL HDKVIGHYLN
IKHYQ