| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0431 |
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| Symbol | |
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| ID | 6273207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 419246 |
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| End bp | 421663 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641724659 |
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| Product | efflux ABC transporter, permease protein |
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| Protein accession | YP_001879208 |
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| Protein GI | 187730667 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCAC GTTGGTTCTG GCGCGAATGG CGTTCGCCGT CGCTATTAAT TGTCTGGCTG
GCGCTAAGCC TGGCGGTGGC CTGCGTGCTG GCGCTGGGCA ATATCAGCGA TCGCATGGAG
AAGGGCTTAA GCCAGCAAAG CCGTGAGTTT ATGGCGGGCG ATCGGGCGTT GCGCAGTTCA
CGCGAAGTGC CGCAAGCGTG GCTGGAGGAA GCGCAAAAGC GCGGCCTGAA AGTCGGCAAG
CAGCTGACTT TCGCCACAAT GACCTTTGCA GGCGACACAC CGCAGCTGGC GAACGTCAAA
GCGGTGGATG ATATCTACCC GATGTATGGC GATCTGCAAA CTAATCCCCC TGGCCTGAAA
CCGCAGGCGG GCAGCGTATT GCTGGCCCCA CGCCTGATGG CACTGCTTAA CCTGAAAACG
GGCGACACCA TTGACGTGGG CGATGCCACC TTGCGGATTG CCGGAGAAGT GATTCAGGAA
CCGGATTCCG GTTTTAACCC CTTCCAGATG GCTCCGCGTC TGATGATGAA TCTGGCGGAT
GTCGATAAAA CCGGAGCCGT GCAGCCGGGG AGTCGGGTCA CCTGGCGTTA TAAATTCGGC
GGCAACGAGA ACCAGCTCGA CGGCTATGAG AAATGGTTGT TACCTCAGCT TAAACCCGAA
CAACGCTGGT ACGGTCTGGA ACAGGACGAA GGCGCGCTGG GGCGATCGAT GGAACGCTCG
CAACAGTTCC TGCTGCTTTC GGCGCTTCTG ACCTTGCTGC TGGCAGTGGC AGTGGCAGCG
GTGGCGGTAG CGATGAATCA TTACTGTCGC AGTCGCTACG ATCTGGTGGC GATCCTCAAA
ACGCTGGGGG CAGGGCGAGC GCAACTGCGT AAGCTAATCG TCGATCAGTG GTTGATGGTG
CTGACGCTTT CAGCCGTTAC CGGTGGGGCC ATAGGCCTGT TGTTCGAAAA CGTGTTGATG
GTGCTGCTCA AGCCCGTTCT GCCTGCTGCA CTACCGCCAG CCAGCCTCTG GCCGTGGCTG
TGGGCGCTTG GCACCATGAC GGTCATCTCG CTGCTGGTGG GGCTACGACC ATACCGCTTG
TTGCTGGCAA CGCAGCCTTT ACGCGTATTA CGTAATGATG TGGTAGCGAA CGTCTGGCCG
CTGAAGTTTT ATCTGCCGAT TGTCAGTATG GTGGTTGTGC TGCTGCTCGC CGGATTAATG
GGTGGCAGCA TGCTGCTTTG GGCGGTGCTG GCGGGCGTGG TAGTACTGGC TTTGCTGTGC
GGTGTGCTGG GCTGGATGCA GCTGAATGTA CTTCGCCGCA TGACGCTGAA ATCGCTACCT
CTGCGCCTGG CGGTTAGCCG CCTGTTACGT CAGCCGTGGT CAACGTTAAG CCAGCTTTCG
GCATTTTCGC TCTCCTTTAT GCTGCTGGCG CTGTTGCTGG TATTGCGTGG CGATCTGCTC
GACCGCTGGC AGCAGCTACC GCCAGAAAGC CCGAACTACT TTTTAATTAA CATCGCCACA
GAACAGGTAG CACCGCTAAA AGCGTTCCTC GCGGAACATC ATATAGTCCC GGAATCATTT
TATCCGGTAG TGCGGGCGCG GCTGACGGCG ATTAACGATA AGCCGACAGA AGGTAATGAA
GATGAGGCGC TTAATCGCGA ACTCAATCTT ACCTGGCAAA ATACGCGGCC CGATCATAAT
CCGATTGTCG CCGGTAACTG GCCGCCAAAA GCCGATGAAG TGTCGATGGA AGAGGGGCTG
GCGAAACGCT TAAACGTTGC CCTCGGTGAT ACCGTGACTT TTATGGGCGA TACCCAGGAG
TTCCGCGCTA AAGTGACCAG CCTGCGCAAA GTGGACTGGG AAAGTCTGCG GCCTAATTTC
TATTTTATTT TCCCGGAAGG GGCATTAGAC GGGCAACCGC AGAGCTGGCT TACCAGTTTC
CGCTGGGAGA ATGGCAACGG CATGTTGACG CAACTCAACC GCCAGTTCCC GACCATTAGC
CTGTTAGATA TTGGCGCGAT TTTAAAACAG GTCGGTCAGG TGCTGGAGCA GGTAAGTCGG
GCGCTGGAGG TGATGGTGGT GCTGGTCACC GCCTGCGGTA TGTTGCTGTT GCTGGCACAG
GTGCAGGTGG GAATGCGCCA GCGTCATCAG GAGCTGGTGG TATGGCGCAC ACTCGGTGCG
GGGAAAAAAC TGCTGCGCAC GACATTGTGG TGTGAGTTCG CCATGCTTGG GTTTGTTTCC
GGCCTGGTGG CCGCAATTGG TGCGGAAACG GCACTGGCAG TGTTGCAGGC GAAAGTGTTT
GATTTCCCGT GGGAGCCAGA CTGGCGATTG TGGATTGTTC TGCCGTGCAG CGGTGCGCTG
CTGCTGTCGC TTTTCGGCGG CTGGCTGGGT GCGCGACTGG TTAAGGGTAA GGCGCTGTTC
AGGCAGTTTG CGGGGTGA
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| Protein sequence | MIARWFWREW RSPSLLIVWL ALSLAVACVL ALGNISDRME KGLSQQSREF MAGDRALRSS
REVPQAWLEE AQKRGLKVGK QLTFATMTFA GDTPQLANVK AVDDIYPMYG DLQTNPPGLK
PQAGSVLLAP RLMALLNLKT GDTIDVGDAT LRIAGEVIQE PDSGFNPFQM APRLMMNLAD
VDKTGAVQPG SRVTWRYKFG GNENQLDGYE KWLLPQLKPE QRWYGLEQDE GALGRSMERS
QQFLLLSALL TLLLAVAVAA VAVAMNHYCR SRYDLVAILK TLGAGRAQLR KLIVDQWLMV
LTLSAVTGGA IGLLFENVLM VLLKPVLPAA LPPASLWPWL WALGTMTVIS LLVGLRPYRL
LLATQPLRVL RNDVVANVWP LKFYLPIVSM VVVLLLAGLM GGSMLLWAVL AGVVVLALLC
GVLGWMQLNV LRRMTLKSLP LRLAVSRLLR QPWSTLSQLS AFSLSFMLLA LLLVLRGDLL
DRWQQLPPES PNYFLINIAT EQVAPLKAFL AEHHIVPESF YPVVRARLTA INDKPTEGNE
DEALNRELNL TWQNTRPDHN PIVAGNWPPK ADEVSMEEGL AKRLNVALGD TVTFMGDTQE
FRAKVTSLRK VDWESLRPNF YFIFPEGALD GQPQSWLTSF RWENGNGMLT QLNRQFPTIS
LLDIGAILKQ VGQVLEQVSR ALEVMVVLVT ACGMLLLLAQ VQVGMRQRHQ ELVVWRTLGA
GKKLLRTTLW CEFAMLGFVS GLVAAIGAET ALAVLQAKVF DFPWEPDWRL WIVLPCSGAL
LLSLFGGWLG ARLVKGKALF RQFAG
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