Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0414 |
Symbol | fsr |
ID | 6272960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 402881 |
End bp | 403627 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641724641 |
Product | fosmidomycin resistance protein |
Protein accession | YP_001879191 |
Protein GI | 187733364 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAATGA GTGAACAAAC CCAGCCTGTG GCGGGCGCGG CTGCGTCAAC GACCAAGGCC CGAACATCGT TTGGTATTTT AGGTGCTATC AGCCTCTCAC ATCTGCTGAA CGACATGATC CAATCGCTGA TTCTGGCGAT TTATCCTCTG CTTCAGTCAG AATTTTCTCT GACATTTATG CAGATTGGCA TGATAACCCT CACCTTCCAG CTCGCCTCTT CGCTACTGCA ACCAGTGGTC GGCTACTGGA CCGATAAATA TCCGATGCCG TGGTCGTTGC CAATTGGCAT GTGCTTTACC TTAAGTGGTC TGGTGCTGCT TGCGCTGGCG GGCAGTTTTG GCGCAGTTCT GCTGGCGGCG GCGCTGGTCG GTACCGGTTC ATCGGTCTTT CATCCGGAAT CTTCTCGCGT AGCCCGTATG GCTTCCGGCG GGCGGCATGG CCTGGCGCAA TCTATCTTTC AGGTCGGCGG CAACTTTGGC AGTTCCCTGG GACCCTTGCT GACGGCGGTG ATTATCGCGC CTTATGGCAA AGGCAACGTT GCCTGGTTTG TGCTTGCGGC ACTGCTGGCG ATCGTGGTGT TGGCGCAAAT TAGCCGTTGG TACTCGGCAC AGCTCCGAAT GAATAAAGGA AAACCCAAAG CGACGATAAT CAATCCACTG CCGCGCAACA AAGTGGTACT GGCAGTCAGC ATTCTGTTAA TCCTCATTTT CTCGAAATAT TTCTATATGG CGAGCATCAG CAGCTAG
|
Protein sequence | MAMSEQTQPV AGAAASTTKA RTSFGILGAI SLSHLLNDMI QSLILAIYPL LQSEFSLTFM QIGMITLTFQ LASSLLQPVV GYWTDKYPMP WSLPIGMCFT LSGLVLLALA GSFGAVLLAA ALVGTGSSVF HPESSRVARM ASGGRHGLAQ SIFQVGGNFG SSLGPLLTAV IIAPYGKGNV AWFVLAALLA IVVLAQISRW YSAQLRMNKG KPKATIINPL PRNKVVLAVS ILLILIFSKY FYMASISS
|
| |