Gene SbBS512_E0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0397 
SymbolkefA 
ID6269291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp384794 
End bp388156 
Gene Length3363 bp 
Protein Length1120 aa 
Translation table11 
GC content52% 
IMG OID641724625 
Productpotassium efflux protein KefA 
Protein accessionYP_001879175 
Protein GI187731930 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATGT TCCAGTATTA CAAACGATCA CGGCATTTTG TTTTTTCAGC ATTTATTGCT 
TTTGTTTTTG TCTTGTTATG CCAGAACACG GCGTTTGCGC GGGCGTCATC GAATGGTGAT
CTGCCGACAA AAGCGGACCT GCAGGCGCAA CTTGACTCAC TAAATAAACA AAAAGATCTT
TCTGCTCAGG ACAAACTGGA GCAGCAGGAT CTGACAGATA CATTAGCCAC CCTCGATAAA
ATCGATCGCA TAAAAGAAGA GACAGTTCAG CTACGGCAAA AAGTCGCTGA AGCGCCGGAA
AAAATGCGCC AGGCGACCGC GGCGTTAACA GCACTTAGCG ATGTCGATAA CGACGAAGAA
ACGCGCAAAA TTCTGAGTAC GCTTTCGTTG CGCCAGCTGG AAACTCGCGT TGCCCAGGCG
CTGGACGATT TGCAAAACGC ACAAAACGAT CTGGCGTCTT ATAACAGCCA GCTGGTTTCG
TTACAGACGC AGCCCGAACG CGTGCAAAAT GCGATGTATA ACGCTTCGCA GCAGCTGCAA
CAAATTCGCA GTCGTCTGGA TGGGACTGAT GTCGGCGAGA CTGCCTTACG TCCCAGCCAG
AAAGTGTTAA TGCAGGCTCA GCAGGCGTTG CTGAATGCGG AGATTGACCA GCAGCGTAAA
AGCCTGGAAG GGAACACCGT CTTGCAGGAT ACCTTGCAAA AGCAACGTGA TTACGTGACG
GCGAACAGCG CCCGTCTGGA GCACCAGTTG CAGCTGTTGC AAGAAGCGGT AAACAGCAAG
CGCCTGACTT TAACTGAAAA AACGGCGCAG GAAGCCGTCT CCCCGGATGA AGCCGCGCGT
ATTCAGGCTA ATCCGCTGGT GAAACAGGAA CTGGAAATTA ACCAGCAGTT AAGTCAGCGT
CTGATTACCG CGACTGAAAA CGGTAATCAG TTGATGCAGC AAAACATTAA AGTCAAAAAC
TGGCTGGAGC GGGCGCTGCA ATCGGAACGC AATATTAAAG AGCAGATTGC CGTCCTGAAG
GGCAGCCTGC TGTTGTCTCG TATCCTTTAC CAGCAACAAC AAACGCTGCC CTCGGCGGAT
GAACTGGAAA ACATGACCAA CCGCATCGCG GATTTGCGTC TCGAACAGTT TGAAGTTAAC
CAGCAGCGTG ATGCACTCTT CCAGAGCGAT GCGTTCGTCA ACAAACTGGA AGAAGGTCAC
ACCAACGAAG TCAACAGCGA AGTTCACGAT GCGTTATTGC AAGTGGTTGA TATGCGTCGC
GAATTGCTGG ATCAACTCAA CAAACAGTTG GGTAACCAGC TGATGATGGC CATTAACCTG
CAAATCAACC AGCAGCAGTT AATGAGCGTA TCGAAAAACC TGAAATCCAT CCTGACTCAG
CAAATCTTTT GGGTGAACAG TAACCGTCCA ATGGACTGGG ACTGGATCAA AGCGTTCCCG
CAAAGCCTGA AAGATGAATT TAAGTCGATG AAAATCACGG TGAACTGGGA AAAAGCCTGG
CCTGCCGTTT TTATCGCTTT CCTCGCCGGT TTGCCGCTGC TGTTGATTGC CGGGCTGATC
CACTGGCGTC TGGGCTGGCT GAAAGCGTAT CAACAAAAAC TGGCTTCCGC TGTGGGTTCC
CTGCGTAACG ATAGCCAGCT CAACACACCA AAAGCGATCC TTATCGACCT GATCCGCGCG
CTGCCGGTGT GCCTGATTAT TCTCGCGGTT GGCCTGATTC TGTTGACCAT GCAGCTCAAC
ATCAGCGAAC TGCTATGGTC GTTCAGCAAA AAACTGGCGA TTTTCTGGCT GGTGTTTGGC
CTGTGCTGGA AGGTACTGGA GAAGAACGGC GTTGCCGTGC GTCACTTCGG CATGCCGGAA
CAGCAGACCA GCCACTGGCG TCGGCAAATT GTCCGCATCA GTCTCGCATT GCTGCCTATC
CATTTCTGGT CTGTGGTGGC AGAACTTTCC CCGCTGCATC TGATGGATGA TGTGCTGGGG
CAAGCGATGA TTTTCTTCAA CCTGCTGCTG ATTGCCTTCC TGGTATGGCC AATGTGCCGC
GAAAGCTGGC GTGATAAAGA GTCGCACACC ATGCGACTGG TCACCATTAC CGTGCTGTCG
ATTATCCCGA TTGCATTGAT GGTGCTGACT GCCACGGGTT ATTTCTACAC CACGCTGCGC
CTCTCCGGGC GTTGGATTGA AACCGTTTAT CTGGTGATCA TCTGGAACTT GCTCTACCAG
ACGGTATTGC GCGGCTTAAG CGTAGCGGCG CGGCGTATCG CCTGGCGTCG TGCGCTGGCG
CGTCGGCAGA ATCTGGTGAA AGAGGGCGCA GAAGGTGCCG AACCGCCGGA AGAACCCACC
ATTGCACTGG AACAGGTTAA CCAGCAGACG CTGCGTATTA CCATGTTGCT GATGTTTGCG
CTGTTCGGTG TCATGTTCTG GGCAATTTGG TCCGATTTGA TCACCGTGTT CAGCTATCTC
GACAGCATTA CGCTCTGGCA TTACAACGGT ACTGAAGCTG GCGCTGCGGT GGTGAAAAAC
GTCACCATGG GCAGTCTGTT GTTTGCGATT ATCGCCTCAA TGGTGGCCTG GGCGTTGATT
CGCAACCTGC CTGGTTTGCT GGAAGTGCTG GTGCTCTCGC GACTGAATAT GCGCCAGGGC
GCGTCGTATG CCATTACTAC CATCCTTAAC TACATCATTA TTGCCGTTGG TGCGATGACG
GTGTTCGGAT CGCTGGGCGT CTCTTGGGAT AAACTCCAGT GGCTGGCGGC AGCATTATCC
GTAGGTCTTG GTTTTGGTTT ACAAGAAATT TTCGGTAACT TCGTCTCCGG TTTGATCATT
CTGTTCGAAC GTCCGGTGCG TATTGGCGAT ACGGTAACCA TTGGTAGCTT CTCGGGGACG
GTAAGTAAGA TCCGTATTCG TGCGACAACG ATTACCGATT TCGATCGCAA AGAAGTGATC
ATCCCGAACA AAGCGTTTGT TACCGAGCGT CTGATCAACT GGTCGTTGAC TGACACTACT
ACGCGTCTGG TGATCCGTCT CGGCGTGGCC TATGGCTCCG ATCTGGAAAA AGTGCGTAAA
GTGTTACTGA AGGCGGCGAC TGAGCACCCA AGGGTGATGC ACGAACCAAT GCCGGAAGTC
TTCTTTACGG CGTTTGGTGC CAGCACGTTG GATCATGAGC TGCGTCTGTA TGTGCGTGAA
CTGCGTGACC GTAGTCGTAC TGTCGATGAG CTGAACCGTA CTATCGATCA GCTGTGCCGT
GAAAACGACA TCAACATTGC CTTTAACCAG CTTGAAGTGC ATCTGCACAA CGAGAAGGGC
GATGAGGTGA CGGAAGTAAA ACGCGACTAC AAAGGCGATG ACCCGACGCC AGCGGTAGGG
TAA
 
Protein sequence
MTMFQYYKRS RHFVFSAFIA FVFVLLCQNT AFARASSNGD LPTKADLQAQ LDSLNKQKDL 
SAQDKLEQQD LTDTLATLDK IDRIKEETVQ LRQKVAEAPE KMRQATAALT ALSDVDNDEE
TRKILSTLSL RQLETRVAQA LDDLQNAQND LASYNSQLVS LQTQPERVQN AMYNASQQLQ
QIRSRLDGTD VGETALRPSQ KVLMQAQQAL LNAEIDQQRK SLEGNTVLQD TLQKQRDYVT
ANSARLEHQL QLLQEAVNSK RLTLTEKTAQ EAVSPDEAAR IQANPLVKQE LEINQQLSQR
LITATENGNQ LMQQNIKVKN WLERALQSER NIKEQIAVLK GSLLLSRILY QQQQTLPSAD
ELENMTNRIA DLRLEQFEVN QQRDALFQSD AFVNKLEEGH TNEVNSEVHD ALLQVVDMRR
ELLDQLNKQL GNQLMMAINL QINQQQLMSV SKNLKSILTQ QIFWVNSNRP MDWDWIKAFP
QSLKDEFKSM KITVNWEKAW PAVFIAFLAG LPLLLIAGLI HWRLGWLKAY QQKLASAVGS
LRNDSQLNTP KAILIDLIRA LPVCLIILAV GLILLTMQLN ISELLWSFSK KLAIFWLVFG
LCWKVLEKNG VAVRHFGMPE QQTSHWRRQI VRISLALLPI HFWSVVAELS PLHLMDDVLG
QAMIFFNLLL IAFLVWPMCR ESWRDKESHT MRLVTITVLS IIPIALMVLT ATGYFYTTLR
LSGRWIETVY LVIIWNLLYQ TVLRGLSVAA RRIAWRRALA RRQNLVKEGA EGAEPPEEPT
IALEQVNQQT LRITMLLMFA LFGVMFWAIW SDLITVFSYL DSITLWHYNG TEAGAAVVKN
VTMGSLLFAI IASMVAWALI RNLPGLLEVL VLSRLNMRQG ASYAITTILN YIIIAVGAMT
VFGSLGVSWD KLQWLAAALS VGLGFGLQEI FGNFVSGLII LFERPVRIGD TVTIGSFSGT
VSKIRIRATT ITDFDRKEVI IPNKAFVTER LINWSLTDTT TRLVIRLGVA YGSDLEKVRK
VLLKAATEHP RVMHEPMPEV FFTAFGASTL DHELRLYVRE LRDRSRTVDE LNRTIDQLCR
ENDINIAFNQ LEVHLHNEKG DEVTEVKRDY KGDDPTPAVG