Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0359 |
Symbol | tig |
ID | 6272739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 349183 |
End bp | 350481 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641724597 |
Product | trigger factor |
Protein accession | YP_001879147 |
Protein GI | 187731745 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000000325154 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAGTTT CAGTTGAAAC CACTCAAGGC CTTGGCCGCC GTGTAACGAT TACTATCGCT GCTGACAGCA TCGAGACCGC TGTTAAAAGC GAGCTGGTCA ACGTTGCGAA AAAAGTACGT ATTGACGGCT TCCGCAAAGG CAAAGTGCCA ATGAATATCG TTGCTCAGCG TTATGGCGCG TCTGTACGCC AGGACGTTCT GGGTGACCTG ATGAGCCGTA ACTTCATTGA CGCCATCATT AAAGAAAAAA TCAATCCGGC TGGCGCACCG ACTTATGTTC CGGGCGAATA CAAGCTGGGT GAAGACTTCA CTTACTCTGT AGAGTTTGAA GTTTATCCGG AAGTTGAACT GCAGGGTCTG GAAGCGATCG AAGTTGAAAA ACCGATCGTT GAAGTGACCG ACGCTGACGT TGACGGCATG CTGGATACTC TGCGTAAACA GCAGGCGACC TGGAAAGAAA AAGACGGCGC TGTTGAAGCA GAAGACCGCG TAACCATCGA CTTCACCGGT TCTGTAGACA GCGAAGAGTT CGAAGGCGGT AAAGCGTCTG ATTTCGTACT GGCGATGGGC CAGGGTCGTA TGATCCCGGG CTTTGAAGAC GGTATCAAAG GCCACAAAGC TGGCGAAGAG TTCACCATCG ACGTGACCTT CCCGGAAGAA TACCACGCAG AAAACCTGAA AGGTAAAGCA GCGAAATTCG CTATCAACCT GAAGAAAGTT GAAGAGCGTG AACTGCCGGA ACTGACTGCA GAATTCATCA AACGTTTCGG CGTTGAAGAT GGTTCCGTAG AAGGTCTGCG CGCTGAAGTG CGTAAAAACA TGGAGCGCGA GCTGAAGAGC GCCATCCGTA ACCGCGTTAA GTCTCAGGCG ATCGAAGGTC TGGTAAAAGC TAACGACATC GACGTACCGG CTGCGCTGAT CGACAGCGAA ATCGACGTTC TGCGTCGCCA GGCTGCACAG CGTTTCGGTG GCAACGAAAA ACAAGCTCTG GAACTGCCGC GCGAACTGTT CGAAGAACAG GCTAAACGCC GCGTAGTTGT TGGCCTGCTG CTGGGCGAAG TTATCCGCAC CAACGAGCTG AAAGCTGACG AAGAGCGCGT GAAAGGCCTG ATCGAAGAGA TGGCTTCTGC GTACGAAGAT CCGAAAGAAG TTATCGAGTT CTACAGCAAA AACAAAGAAC TGATGGACAA CATGCGCAAT GTTGCTCTGG AAGAACAGGC TGTTGAAGCT GTACTGGCGA AAGCGAAAGT GACTGAAAAA GAAACCACTT TCAACGAGCT GATGAACCAG CAGGCGTAA
|
Protein sequence | MQVSVETTQG LGRRVTITIA ADSIETAVKS ELVNVAKKVR IDGFRKGKVP MNIVAQRYGA SVRQDVLGDL MSRNFIDAII KEKINPAGAP TYVPGEYKLG EDFTYSVEFE VYPEVELQGL EAIEVEKPIV EVTDADVDGM LDTLRKQQAT WKEKDGAVEA EDRVTIDFTG SVDSEEFEGG KASDFVLAMG QGRMIPGFED GIKGHKAGEE FTIDVTFPEE YHAENLKGKA AKFAINLKKV EERELPELTA EFIKRFGVED GSVEGLRAEV RKNMERELKS AIRNRVKSQA IEGLVKANDI DVPAALIDSE IDVLRRQAAQ RFGGNEKQAL ELPRELFEEQ AKRRVVVGLL LGEVIRTNEL KADEERVKGL IEEMASAYED PKEVIEFYSK NKELMDNMRN VALEEQAVEA VLAKAKVTEK ETTFNELMNQ QA
|
| |