Gene SbBS512_E0352 details

Gene Information

• Locus tag: SbBS512_E0352
• Symbol: cyoC
• ID: 6270004
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 342095
• End bp: 342709
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641724590
• Product: cytochrome o ubiquinol oxidase subunit III
• Protein accession: YP_001879140
• Protein GI: 187731346
• COG category: [C] Energy production and conversion
• COG ID: [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3
• TIGRFAM ID: [TIGR02842] cytochrome o ubiquinol oxidase, subunit III

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAACTG ATACTTTGAC GCACGCGACT GCCCACGCGC ACGAACACGG GCACCACGAT 
GCAGGCGGAA CCAAAATCTT CGGATTTTGG ATCTACCTGA TGAGCGACTG CATTCTGTTC 
TCAATCTTGT TTGCTACCTA TGCCGTTCTG GTGAACGGCA CCGCAGGCGG CCCGACAGGT 
AAGGACATTT TCGAACTGCC GTTCGTTCTG GTTGAAACTT TCTTGCTGTT GTTCAGCTCC 
ATCACCTACG GCATGGCGGC TATCGCCATG TACAAAAACA ACAAAAGCCA GGTTATCTCC 
TGGCTGGCGT TGACCTGTTT GTTTGGTGCC GGATTTATCG GGATGGAAAT CTACGAATTC 
CATCACCTGA TTGTTAACGG CATGGGTCCG GATCGCAGCG GCTTCCTGTC AGCGTTCTTT 
GCGCTGGTCG GCACGCACGG TCTGCACGTC ACTTCCGGTC TTATCTGGAT GGCGGTGCTG 
ATGGTACAAA TCGCTCGTCG CGGCCTGACC AGCACTAACC GTACCCGCAT CATGTGCCTG 
AGCCTGTTCT GGCACTTCCT GGATGTGGTT TGGATCTGTG TGTTCACTGT TGTTTATCTG 
ATGGGGGCGA TGTAA 

 

Protein sequence

MATDTLTHAT AHAHEHGHHD AGGTKIFGFW IYLMSDCILF SILFATYAVL VNGTAGGPTG 
KDIFELPFVL VETFLLLFSS ITYGMAAIAM YKNNKSQVIS WLALTCLFGA GFIGMEIYEF 
HHLIVNGMGP DRSGFLSAFF ALVGTHGLHV TSGLIWMAVL MVQIARRGLT STNRTRIMCL 
SLFWHFLDVV WICVFTVVYL MGAM