Gene SbBS512_E0326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0326 
SymbolyajC 
ID6270711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp320685 
End bp321017 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content49% 
IMG OID641724564 
Productpreprotein translocase subunit YajC 
Protein accessionYP_001879114 
Protein GI187733401 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTTT TTATTTCTGA TGCGGTAGCG GCAACGGGTG CACCGGTGCA AGGTAGCCCG 
ATGTCTTTGA TTTTGATGCT GGTGGTATTC GGTCTGATTT TCTATTTCAT GATCCTGCGT
CCACAGCAGA AGCGCACCAA AGAACACAAA AAGCTGATGG ACTCCATTGC CAAAGGTGAT
GAAGTTCTGA CGAACGGTGG CCTGGTTGGT CGCGTAACCA AAGTAGCGGA AAACGGCTAC
ATTGCTATCG CGCTGAATGA CACCACTGAA GTAGTTATTA AACGTGACTT CGTAGCTGCC
GTCCTGCCGA AAGGCACCAT GAAGGCGCTG TAA
 
Protein sequence
MSFFISDAVA ATGAPVQGSP MSLILMLVVF GLIFYFMILR PQQKRTKEHK KLMDSIAKGD 
EVLTNGGLVG RVTKVAENGY IAIALNDTTE VVIKRDFVAA VLPKGTMKAL