| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0315 |
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| Symbol | araJ |
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| ID | 6271598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 304793 |
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| End bp | 306061 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641724554 |
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| Product | MFS transport protein AraJ |
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| Protein accession | YP_001879104 |
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| Protein GI | 187732035 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCTTGC TGGTCGTTAT CCTGCAAGCT ATCACTTTAT TGGCTACGGT GATTGGTAGC
CGTTCTGGTG GTTGTGATGA TGGTATGAAA AAAGTCATTT TATCTTTGGC TCTGGGCACG
TTTGGTTTGG GGATGGCCGA ATTTGGCATT ATGGGCGTGC TCACGGAGCT GGCGCATAAC
GTAGGAATTT CGATTCCTGC TGCCGGGCAT ATGATCTCGT ATTATGCACT GGGGGTGGTG
GTCGGTGCGC CAATCATCGC ACTCTTTTCC AGCCGCTACT CACTCAAACA TATCTTGTTG
TTTCTGGTGG CGTTGTGCGT CATTGGCAAC GCCATGTTCA CGCTCTCTTC GTCTTACCTG
ATGCTCGCCA TTGGTCGGCT GGTATCCGGC TTTCCGCATG GCGCATTTTT TGGCGTCGGC
GCGATCGTGT TATCAAAAAT TATCAAACCC GGAAAAGTCA CCGCCGCCGT GGCGGGGATG
GTTTCCGGGA TGACAGTCGC CAATTTGCTG GGCATTCCGC TGGGAACGTA TTTAAGTCAG
GAATTTAGCT GGCGTTACAC CTTTTTATTG ATCGCTGTTT TTAATATTGC GGTGATGGCA
TCGGTCTATT TTTGGGTGCC GGATATTCGC GACGAGGCGA AAGGAAAGCT GCGCGAACAA
TTTCACTTTT TGCGCAGCCC GGCCCCGTGG TTAATTTTCG CCGCCACCAT GTTTGGCAAC
GCAGGTGTGT TTGCCTGGTT CAGCTACGTA AAGCCATACA TGATGTTTAT TTCCGGTTTT
TCGGAAACGG CGATGACCTT TATTATGATG TTAGTTGGGC TAGGGATGGT GCTGGGAAAT
ATGCTAAGTG GCAGGATTTC AGGACGTTAT TCACCACTGC GCATTGCAGC AGTGACTGAC
TTTATAATTG TACTGGCACT GCTGATGCTC TTTTTCTGCG GCGGCATGAA AACAACGTCG
CTTATTTTTG CTTTTATTTG TTGCGCGGGA TTATTTGCCC TTTCAGCACC GCTACAAATA
TTGTTACTAC AAAACGCCAA AGGCGGAGAG TTATTAGGTG CCGCAGGTGG GCAAATAGCG
TTTAACCTCG GTAGCGCCGT CGGCGCATAT TGCGGTGGTA TGATGCTGAC GCTGGGGCTG
GCATATAATT ACGTGGCGCT GCCTGCCGCC CTGCTTTCGT TTGCTGCGAT GTCGTCGTTG
CTGCTGTATG GTCGCTATAA GCGCCAGCAA GCGGCGGATA CTCCGGTGCT GGCGAAACCA
CTGGGGTAG
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| Protein sequence | MALLVVILQA ITLLATVIGS RSGGCDDGMK KVILSLALGT FGLGMAEFGI MGVLTELAHN
VGISIPAAGH MISYYALGVV VGAPIIALFS SRYSLKHILL FLVALCVIGN AMFTLSSSYL
MLAIGRLVSG FPHGAFFGVG AIVLSKIIKP GKVTAAVAGM VSGMTVANLL GIPLGTYLSQ
EFSWRYTFLL IAVFNIAVMA SVYFWVPDIR DEAKGKLREQ FHFLRSPAPW LIFAATMFGN
AGVFAWFSYV KPYMMFISGF SETAMTFIMM LVGLGMVLGN MLSGRISGRY SPLRIAAVTD
FIIVLALLML FFCGGMKTTS LIFAFICCAG LFALSAPLQI LLLQNAKGGE LLGAAGGQIA
FNLGSAVGAY CGGMMLTLGL AYNYVALPAA LLSFAAMSSL LLYGRYKRQQ AADTPVLAKP
LG
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