Gene SbBS512_E0268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0268 
Symbol 
ID6270838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp267234 
End bp267725 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content43% 
IMG OID641724510 
Productputative HTH-type transcriptional regulator YkgA 
Protein accessionYP_001879060 
Protein GI187732445 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGGC AGAAGATTCT ACAGCAGCTC CTGGAGTGGA TTGAGTGCAA TCTTGAGCAC 
CCTATTTCAA TCGAAGATAT CGCACAGAAA TCTGGCTACA GCAGACGCAA CATCCAGCTT 
CTGTTCCGAA ATTTCATGCA TGTGCCTTTG GGAGAATACA TTCGCAAACG AAGGCTTTGC 
CGTGCCGCCA TTCTTGTCCG GCTCACCGCG AAATCTATGC TTGATATTGC ACTCTCTTTG 
CATTTTGATT CACAGCAGTC ATTCAGCCGC GAATTTAAAA AGTTATTCGG CTGCTCTCCC 
CGTGAATACC GCCACCGTGA TTATTGGGAT CTCGCAAATA TCTTCCCTTC TTTTTTAATA 
CGTCAACAGC AAAAGACGGA GTGTAGATTA GTCAATTTTC CTGAGACACC TATTTTTGGC 
AACTCATTTA AATATGACAT TGAAGTGTCG AATAAATCAC CGGATGAAGA AGTAATGCTG 
CCAACTTACT GA
 
Protein sequence
MIRQKILQQL LEWIECNLEH PISIEDIAQK SGYSRRNIQL LFRNFMHVPL GEYIRKRRLC 
RAAILVRLTA KSMLDIALSL HFDSQQSFSR EFKKLFGCSP REYRHRDYWD LANIFPSFLI 
RQQQKTECRL VNFPETPIFG NSFKYDIEVS NKSPDEEVML PTY