| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0228 |
|---|
| Symbol | dinP |
|---|
| ID | 6272955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 236157 |
|---|
| End bp | 237221 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641724476 |
|---|
| Product | DNA polymerase IV |
|---|
| Protein accession | YP_001879027 |
|---|
| Protein GI | 187733383 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.190428 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTATAAGA AAGTGAAGAT TATTCATGTG GATATGGACT GCTTTTTCGC GGCGGTGGAG
ATGCGCGACA ATCCCGCCCT GCGCGATATC CCTATTGCTA TTGGCGGCAG CCGCGAACGT
CGGGGGGTGA TCAGTACCGC CAATTATCCC GCGCGTAAAT TTGGCGTACG TAGCGCTATG
CCGACAGGGA TGGCGCTCAA ATTATGCCCG CATCTCACCT TGCTTCCGGG GCGCTTTGAC
GCCTACAAAG AAGCCTCAAA TCATATCCGC GAAATCTTCT CGCGCTACAC CTCGCGTATT
GAACCGTTGT CACTGGATGA GGCTTATCTC GACGTCACCG ATAGCGTCCA TTGCCACGGT
TCTGCGACCC TCATCGCCCA GGAAATCCGC CAGACGATTT TCAACGAGCT GCAACTGACG
GCGTCTGCGG GCGTGGCACC CGTAAAGTTT CTCGCCAAAA TCGCCTCCGA CATGAATAAA
CCCAACGGCC AGTTTGTGAT TACGCCGGCA GAAGTTCCGG CATTTTTACA AACCTTACCA
CTGGCAAAAA TCCCCGGCGT CGGCAAAGTC TCGGCGGCAA AACTGGAAGC GATGGGGCTA
CGAACCTGCG GTGATGTACA AAAGTGTGAT CTGGTGATGC TGCTTAAACG CTTTGGCAAA
TTTGGCCGCA TTTTGTGGGA GCGTAGTCAG GGGATTGACG AGCGCGACGT TAACAGCGAA
CGGTTGCGAA AATCCGTCGG CGTGGAACGC ACGATGGCGG AAGATATCCA CCACTGGTCT
GAATGTGAAG CGATTATCGA GCGGCTGTAT CCGGAACTTG AACGCCGTCT GGCAAAGGTG
AAACCTGATT TACTGATTGC TCGCCAGGGG GTGAAATTAA AGTTTGATGA TTTTCAGCAA
ACCACTCAGG AGCACGTCTG GCCGCGGCTG AATAAAGCTG ACTTAATCGC CACCGCGCGT
AAAACCTGGG ATGAACGCCG CGGCGGGCGC GGTGTGCGAC TGGTGGGGCT GCATGTGACG
TTGCTTGACC CGCAAATGGA AAGACAACTG GTGCTGGGAT TATGA
|
|---|
| Protein sequence | MYKKVKIIHV DMDCFFAAVE MRDNPALRDI PIAIGGSRER RGVISTANYP ARKFGVRSAM
PTGMALKLCP HLTLLPGRFD AYKEASNHIR EIFSRYTSRI EPLSLDEAYL DVTDSVHCHG
SATLIAQEIR QTIFNELQLT ASAGVAPVKF LAKIASDMNK PNGQFVITPA EVPAFLQTLP
LAKIPGVGKV SAAKLEAMGL RTCGDVQKCD LVMLLKRFGK FGRILWERSQ GIDERDVNSE
RLRKSVGVER TMAEDIHHWS ECEAIIERLY PELERRLAKV KPDLLIARQG VKLKFDDFQQ
TTQEHVWPRL NKADLIATAR KTWDERRGGR GVRLVGLHVT LLDPQMERQL VLGL
|
|---|
| |