Gene SbBS512_E0218 details

Gene Information

• Locus tag: SbBS512_E0218
• Symbol: gmhA
• ID: 6269861
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 229018
• End bp: 229596
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641724467
• Product: phosphoheptose isomerase
• Protein accession: YP_001879018
• Protein GI: 187730330
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0279] Phosphoheptose isomerase
• TIGRFAM ID: [TIGR00441] phosphoheptose isomerase

Plasmid Coverage information

• Num covering plasmid clones: 47
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACCAGG ATCTTATTCG TAACGAACTG AACGAAGCGG CGGAAACGCT GGCTAACTTT 
TTAAAAGATG ACGCCAATAT TCACGCCATT CAGCGCGCGG CGGTCCTGTT AGCAGACAGC 
TTTAAAGCCG GTGGCAAAGT GCTTTCCTGC GGCAACGGCG GTTCCCATTG CGACGCTATG 
CACTTTGCCG AAGAGTTGAC CGGTCGCTAC CGTGAAAACC GTCCGGGCTA CCCGGCGATT 
GCTATTTCTG ACGTTAGTCA TATTTCCTGC GTCGGTAATG ATTTCGGTTT CAATGATATT 
TTCTCCCGCT ACGTTGAAGC GGTAGGTCGC GAAGGCGATG TACTGCTGGG GATCTCCACC 
TCCGGTAACT CTGCAAACGT GATCAAAGCG ATCGCAGCGG CGCGTGAGAA GGGGATGAAA 
GTGATCACCC TGACCGGTAA AGACGGCGGC AAAATGGCTG GCACGGCGGA TATCGAAATT 
CGCGTACCGC ACTTTGGTTA TGCCGACCGC ATTCAGGAGA TTCACATTAA AGTGATCCAT 
ATCCTGATCC AGTTAATTGA AAAAGAGATG GTTAAGTAA 

 

Protein sequence

MYQDLIRNEL NEAAETLANF LKDDANIHAI QRAAVLLADS FKAGGKVLSC GNGGSHCDAM 
HFAEELTGRY RENRPGYPAI AISDVSHISC VGNDFGFNDI FSRYVEAVGR EGDVLLGIST 
SGNSANVIKA IAAAREKGMK VITLTGKDGG KMAGTADIEI RVPHFGYADR IQEIHIKVIH 
ILIQLIEKEM VK