Gene SbBS512_E0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0176 
SymbolrnhB 
ID6271758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp191370 
End bp191966 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content57% 
IMG OID641724427 
Productribonuclease HII 
Protein accessionYP_001878985 
Protein GI187731145 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0723713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAAT TTGTTTATCC GCACACGCAG CTGGTTGCGG GTGTGGATGA AGTCGGACGC 
GGGCCGTTAG TTGGCGCGGT CGTCACCGCT GCGGTGATCC TTGACCCGGC GCGCCCGATT 
GCCGGGCTGA ATGATTCCAA AAAGCTGAGC GAAAAACGCC GTCTGGCGCT CTGTGAAGAG 
ATCAAAGAGA AAGCGTTGAG CTGGAGTCTG GGCCGCGCGG AACCCCACGA AATCGACGAG 
CTGAACATTC TTCATGCGAC CATGCTGGCG ATGCAGCGTG CCGTCGCTGG GCTGCATATT 
GCGCCGGAAT ATGTGTTGAT TGATGGTAAC CGCTGCCCGA AATTACCGAT GCCTGCGATG 
GCTGTGGTGA AAGGCGATAG CCGCGTACCG GAAATCAGTG CCGCGTCTAT CCTGGCGAAA 
GTGACGCGTG ACGCCGAAAT GGCGGCGCTG GATATTGTTT TCCCGCAATA TGGTTTTGCC 
CAACACAAAG GGTACCCAAC CGCTTTTCAT CTGGAAAAAC TGGCTGAACA CGGCGCGACC 
GAACACCATC GGCGCAGCTT TGGGCCTGTC AAACGCGCAC TGGGACTTGC GTCCTGA
 
Protein sequence
MIEFVYPHTQ LVAGVDEVGR GPLVGAVVTA AVILDPARPI AGLNDSKKLS EKRRLALCEE 
IKEKALSWSL GRAEPHEIDE LNILHATMLA MQRAVAGLHI APEYVLIDGN RCPKLPMPAM 
AVVKGDSRVP EISAASILAK VTRDAEMAAL DIVFPQYGFA QHKGYPTAFH LEKLAEHGAT 
EHHRRSFGPV KRALGLAS