Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0174 |
Symbol | lpxA |
ID | 6270988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 189437 |
End bp | 190225 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641724425 |
Product | UDP-N-acetylglucosamine acyltransferase |
Protein accession | YP_001878983 |
Protein GI | 187730463 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase |
TIGRFAM ID | [TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00000126521 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATTGATA AATCCGCCTT TGTGCATCCA ACCGCCATTG TGGAAGAGGG CGCGTCAATT GGCGCGAACG CACACATTGG TCCTTTTTGT ATCGTTGGAC CCCATGTCGG AATTGGTGAG GGTACCGTAC TGAAATCTCA CGTTGTCGTG AATGGTCATA CTAAAATTGG CCGCGATAAT GAGATTTATC AGTTCGCCTC CATCGGCGAA GTTAACCAGG ATCTGAAATA TGCTGGCGAA CCGACCCGTG TGGAAATCGG CGATCGTAAC CGCATTCGCG AAAGCGTCAC CATTCATCGT GGCACAGTCC AGGGCGGTGG ATTGACGAAG GTGGGCAGCG ACAACTTACT GATGATCAAC GCGCACATTG CGCACGATTG TACGGTAGGT AACCGCTGTA TTCTCGCCAA CAACGCAACG CTGGCGGGTC ACGTATCGGT TGACGACTTC GCGATCATCG GCGGCATGAC CGCAGTCCAT CAGTTCTGCA TCATTGGTGC GCACGTGATG GTTGGCGGCT GCTCCGGTGT GGCGCAGGAC GTCCCTCCTT ATGTCATTGC GCAGGGTAAC CACGCAACGC CGTTCGGTGT CAATATCGAA GGGCTGAAGC GCCGCGGATT CAGCCGTGAG GCGATTACCG CTATCCGCAA TGCGTATAAG CTGATTTATC GTAGCGGTAA AACGCTCGAT GAAGTGAAAC CGGAAATTGC TGAACTGGCG GAAACATATC CGGAAGTGAA AGCCTTTACC GATTTCTTTT CACGCTCAAC GCGCGGTCTG ATTCGTTAA
|
Protein sequence | MIDKSAFVHP TAIVEEGASI GANAHIGPFC IVGPHVGIGE GTVLKSHVVV NGHTKIGRDN EIYQFASIGE VNQDLKYAGE PTRVEIGDRN RIRESVTIHR GTVQGGGLTK VGSDNLLMIN AHIAHDCTVG NRCILANNAT LAGHVSVDDF AIIGGMTAVH QFCIIGAHVM VGGCSGVAQD VPPYVIAQGN HATPFGVNIE GLKRRGFSRE AITAIRNAYK LIYRSGKTLD EVKPEIAELA ETYPEVKAFT DFFSRSTRGL IR
|
| |