| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0170 |
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| Symbol | yaeT |
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| ID | 6272485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 184805 |
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| End bp | 187237 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641724421 |
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| Product | outer membrane protein assembly factor YaeT |
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| Protein accession | YP_001878979 |
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| Protein GI | 187733865 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000513305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATGA AAAAGTTGCT CATAGCGTCG CTGCTGTTTA GCAGCGCCAC CGTATACGGT
GCTGAAGGGT TCGTAGTGAA AGATATTCAT TTCGAAGGCC TTCAGCGTGT CGCCGTTGGT
GCGGCCCTCC TCAGTATGCC GGTGCGTACA GGCGACACGG TTAATGATGA AGATATCAGT
AATACCATTC GCGCTCTGTT TGCTACCGGC AACTTTGAGG ATGTTCGCGT CCTTCGTGAT
GGTGATACCC TTCTGGTTCA GGTAAAAGAA CGTCCGACCA TTGCCAGCAT TACTTTCTCC
GGTAACAAAT CGGTGAAAGA TGACATGCTG AAGCAAAACC TCGAGGCTTC TGGTGTGCGT
GTGGGCGAAT CCCTCGATCG CACCACCATT GCCGATATCG AGAAAGGTCT GGAAGACTTC
TACTACAGCG TCGGTAAATA TAGCGCCAGC GTAAAAGCTG TCGTGACCCC GCTGCCGCGC
AACCGTGTTG ACCTAAAACT GGTGTTCCAG GAAGGTGTGT CAGCTGAAAT CCAGCAAATT
AACATTGTTG GTAACCATGC TTTCACCACC GACGAACTGA TCTCTCATTT CCAACTGCGT
GACGAAGTGC CGTGGTGGAA CGTGGTAGGC GATCGTAAAT ACCAGAAACA GAAACTGGCG
GGCGACCTTG AAACCCTGCG CAGCTACTAT CTGGATCGCG GTTATGCCCG TTTCAACATC
GACTCTACCC AGGTCAGTCT GACGCCAGAT AAAAAAGGTA TTTACGTCAC GGTGAACATT
ACCGAAGGCG ATCAGTACAA GCTTTCTGGC GTTGAAGTGA GCGGCAACCT TGCCGGGCAC
TCCGCTGAAA TTGAGCAGCT GACTAAGATC GAGCCGGGCG AGCTGTATAA CGGCACCAAA
GTGACCAAGA TGGAAGATGA CATCAAAAAG CTTCTCGGTC GCTATGGTTA TGCCTATCCG
CGCGTACAGT CGATGCCTGA AATTAACGAT GCCGACAAAA CCGTTAAATT ACGCGTGAAC
GTTGATGCGG GTAACCGTTT CTACGTGCGT AAGATCCGTT TTGAAGGTAA CGATACCTCG
AAAGATGCCG TCCTGCGTCG CGAAATGCGT CAGATGGAAG GTGCATGGCT GGGAAGCGAT
CTGGTCGATC AGGGTAAGGA GCGTCTGAAT CGTCTGGGCT TCTTTGAAAC TGTCGATACC
GATACCCAAC GTGTTCCGGG TAGCCCGGAC CAAGTAGATG TAGTCTACAA GGTGAAAGAA
CGTAACACCG GTAGCTTCAA CTTCGGGATT GGTTACGGTA CTGAAAGTGG CGTGAGCTTC
CAGGCTGGCG TGCAACAGGA TAACTGGTTA GGTACAGGTT ATGCTGTTGG TATCAACGGG
ACCAAAAACG ATTACCAGAC CTATGCTGAA TTGTCGGTAA CCAACCCGTA CTTCACTGTA
GATGGTGTAA GCCTCGGTGG TCGTCTCTTC TATAATGACT TCCAGGCAGA TGACGCCGAC
CTGTCCGACT ATACCAACAA GAGTTATGGT ACAGACGTGA CGTTGGGCTT CCCGATCAAC
GAATATAACT CGCTGCGTGC AGGTCTGGGT TATGTACATA ACTCCCTGTC CAACATGCAG
CCTCAGGTTG CGATGTGGCG TTATCTGTAC TCTATGGGTG AACATCCGAG CACCTCTGAT
CAGGATAACA GCTTCAAAAC GGACGACTTC ACGTTCAACT ATGGTTGGAC CTATAACAAG
CTTGACCGTG GTTACTTCCC GACAGATGGT TCACGTGTCA ACCTGACCGG TAAAGTGACC
ATTCCTGGAT CGGATAACGA ATACTACAAA GTGACGTTAG ACACGGCGAC TTATGTGCCG
ATCGATGACG ATCACAAATG GGTTGTTCTG GGGCGTACCC GCTGGGGTTA TGGTGATGGT
TTAGGCGGCA AAGAGATGCC GTTCTACGAG AACTTCTATG CCGGTGGTTC CAGCACCGTC
CGTGGCTTCC AGTCCAATAC CATTGGTCCG AAAGCAGTTT ACTTCCCGCA TCAGGCCAGT
AATTATGATC CGGACTATGA TTACGAATGT GCGACTCAGG ACGGCGCGAA AGACCTGTGT
AAATCGGATG ATGCTGTAGG CGGTAACGCC ATGGCGGTTG CCAGCCTCGA GTTCATCACC
CCGACGCCGT TTATTAGCGA TAAGTATGCT AACTCGGTTC GTACTTCCTT CTTCTGGGAT
ATGGGTACCG TTTGGGATAC AAACTGGGAT TCCAGCCAAT ATTCTGGATA TCCGGACTAT
AGTGATCCAA GCAATATCCG TATGTCTGCG GGTATCGCAT TACAATGGAT GTCCCCATTG
GGGCCGTTGG TGTTCTCCTA CGCCCAGCCG TTCAAAAAGT ACGATGGAGA CAAGGCAGAA
CAGTTCCAGT TTAACATCGG TAAAACCTGG TAA
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| Protein sequence | MAMKKLLIAS LLFSSATVYG AEGFVVKDIH FEGLQRVAVG AALLSMPVRT GDTVNDEDIS
NTIRALFATG NFEDVRVLRD GDTLLVQVKE RPTIASITFS GNKSVKDDML KQNLEASGVR
VGESLDRTTI ADIEKGLEDF YYSVGKYSAS VKAVVTPLPR NRVDLKLVFQ EGVSAEIQQI
NIVGNHAFTT DELISHFQLR DEVPWWNVVG DRKYQKQKLA GDLETLRSYY LDRGYARFNI
DSTQVSLTPD KKGIYVTVNI TEGDQYKLSG VEVSGNLAGH SAEIEQLTKI EPGELYNGTK
VTKMEDDIKK LLGRYGYAYP RVQSMPEIND ADKTVKLRVN VDAGNRFYVR KIRFEGNDTS
KDAVLRREMR QMEGAWLGSD LVDQGKERLN RLGFFETVDT DTQRVPGSPD QVDVVYKVKE
RNTGSFNFGI GYGTESGVSF QAGVQQDNWL GTGYAVGING TKNDYQTYAE LSVTNPYFTV
DGVSLGGRLF YNDFQADDAD LSDYTNKSYG TDVTLGFPIN EYNSLRAGLG YVHNSLSNMQ
PQVAMWRYLY SMGEHPSTSD QDNSFKTDDF TFNYGWTYNK LDRGYFPTDG SRVNLTGKVT
IPGSDNEYYK VTLDTATYVP IDDDHKWVVL GRTRWGYGDG LGGKEMPFYE NFYAGGSSTV
RGFQSNTIGP KAVYFPHQAS NYDPDYDYEC ATQDGAKDLC KSDDAVGGNA MAVASLEFIT
PTPFISDKYA NSVRTSFFWD MGTVWDTNWD SSQYSGYPDY SDPSNIRMSA GIALQWMSPL
GPLVFSYAQP FKKYDGDKAE QFQFNIGKTW
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