| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0167 |
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| Symbol | uppS |
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| ID | 6271347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 181783 |
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| End bp | 182541 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641724418 |
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| Product | undecaprenyl pyrophosphate synthase |
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| Protein accession | YP_001878976 |
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| Protein GI | 187731191 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00639838 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGTCTG CTACTCAACC ACTTAGCGAA AAATTGCCAG CGCATGGCTG CCGTCATGTT
GCGATCATTA TGGACGGCAA TGGTCGCTGG GCAAAAAAGC AAGGGAAGAT TCGTGCCTTT
GGGCATAAAG CCGGGGCAAA ATCCGTCCGC CGGGCTGTCT CTTTTGCGGC CAACAACGGT
ATTGAGGCGT TAACGCTGTA TGCCTTTAGT AGTGAAAACT GGAACCGACC AGCGCAGGAA
GTCAGTGCGT TAATGGAACT GTTTGTGTGG GCGCTCGATA GCGAAGTAAA AAGTCTGCAC
CGACATAACG TGCGTCTGCG TATTATTGGC GATACCAGTC GCTTTAACTC GCGTTTGCAA
GAATGTATTC GTAAATCTGA AGCGCTAACA GCCGGGAATA CCGGTCTGAC GCTGAATATT
GCGGCGAACT ACGGTGGACG TTGGGATATA GTCCAGGGAG TCAGGCAACT GGCTGAAAAG
GTGCAGCAAG GAAACCTGCA ACCAGATCAG ATAGATGAAG AGATGCTAAA CCAGCATGTC
TGTATGCATG AACTGGCCCC TGTAGATTTA GTAATTAGGA CTGGGGGGGA GCATCGCATT
AGTAACTTTT TGCTTTGGCA AATTGCCTAT GCCGAACTTT ACTTTACAGA TGTTCTCTGG
CCCGATTTCG ATGAACAAGA CTTTGAAGGG GCGTTAAATG CCTTTGCTAA TCGAGAGCGT
CGTTTCGGCG GCACCGAGCC CGGTGATGAA ACAGCCTGA
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| Protein sequence | MLSATQPLSE KLPAHGCRHV AIIMDGNGRW AKKQGKIRAF GHKAGAKSVR RAVSFAANNG
IEALTLYAFS SENWNRPAQE VSALMELFVW ALDSEVKSLH RHNVRLRIIG DTSRFNSRLQ
ECIRKSEALT AGNTGLTLNI AANYGGRWDI VQGVRQLAEK VQQGNLQPDQ IDEEMLNQHV
CMHELAPVDL VIRTGGEHRI SNFLLWQIAY AELYFTDVLW PDFDEQDFEG ALNAFANRER
RFGGTEPGDE TA
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