Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0157 |
Symbol | |
ID | 6270693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 171133 |
End bp | 171876 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641724407 |
Product | phosphodiesterase YaeI |
Protein accession | YP_001878966 |
Protein GI | 187730533 |
COG category | [R] General function prediction only |
COG ID | [COG1408] Predicted phosphohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTACT GGGAGCCAGG CTGGTTTGAA TTAATCCGTC ACCGCCTCGC CTTTTTTAAA GACAACGCAG CACCATTCAA AATTCTTTTT CTGGCCGATC TCCATTACTC TCGTTTTGTT CCTTTAAGCC TGATTTCTGA CGCGATTGCT CTTGGCATAG AACAAAAGCC CGATTTGATA TTACTGGGCG GCGATTACGT ATTATTTGAT ATGCCGCTGA ATTTTTCGGC GTTTAGTGAT GTCCTCTCCC CCCTTGCCGA ATGTGCGCCG ACGTTTGCCT GCTTCGGCAA CCACGATCGC CCTGTTGGTA CAGAAAAAAA TCACTTAATT GGCGAGACGT TGAAATCAGT GGGCATCACG GTGTTGTTTA ACCAGGCTAC GGTGATCGCC ACGCCGAACA GGCAATTCGA ACTGGTAGGC ACCGGTGACT TATGGGCCGG ACAATGCAAA CCACCTCCCG CCAGCGAAGC AAATCTGCCA AGACTGATGC TGGCACATAA TCCCGACAGC AAAGAAGTCA TGCGTGATGA ACCCTGGGAT CTGATGCTGT GCGGCCATAC TCACGGCGGG CAACTGCGCG TACCGTTGGT TGGTGAACCT TTTGCCCCTG TCGAAGATAA ACGTTACGTC GCCGGATTAA ATGCCTTTGG CGAACGACAC ATCTACACAA CCCGTGGCGT GGGCAGTTTG TATGGTTTGC GTCTGAACTG CCGCCCGGAA GTAACGATGC TGGAACTGGT GTAG
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Protein sequence | MHYWEPGWFE LIRHRLAFFK DNAAPFKILF LADLHYSRFV PLSLISDAIA LGIEQKPDLI LLGGDYVLFD MPLNFSAFSD VLSPLAECAP TFACFGNHDR PVGTEKNHLI GETLKSVGIT VLFNQATVIA TPNRQFELVG TGDLWAGQCK PPPASEANLP RLMLAHNPDS KEVMRDEPWD LMLCGHTHGG QLRVPLVGEP FAPVEDKRYV AGLNAFGERH IYTTRGVGSL YGLRLNCRPE VTMLELV
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