| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0151 |
|---|
| Symbol | mtnN |
|---|
| ID | 6268423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 165335 |
|---|
| End bp | 166033 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641724403 |
|---|
| Product | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
|---|
| Protein accession | YP_001878962 |
|---|
| Protein GI | 187731379 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0775] Nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
[TIGR01705] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCG GCATCATTGG TGCAATGGAA GAAGAAGTTA CGCTGCTGCG TGACAAAATC
GAAAATCGTC AAACTATCAG TCTCGGCGGT TGCGAAATCT ATACCGGCCA ACTGAATGGA
ACCGAGGTTG CGCTTCTGAA ATCGGGCATC GGTAAAGTCG CTGCGGCGCT GGGTGCCACT
TTGCTGTTGG AACACTGCAA GCCAGATGTG ATTATTAACA CCGGTTCTGC CGGTGGCCTG
GCACCAACGT TGAAAGTGGG CGATATCGTT GTCTCGGACG AAGCACGTTA TCACGACGCG
GATGTCACGG CATTTGGTTA TGAATACGGT CAGTTACCAG GCTGTCCGGC AGGCTTTAAA
GCTGACGATA AACTGATCGC TGCCGCTGAG GCCTGCATTG CCGAACTGAA TCTTAACGCT
GTACGTGGCC TGATTGTTAG CGGCGACGCT TTCATCAACG GTTCTGTTGG TCTGGCGAAA
ATCCGCCACA ACTTCCCACA GGCCATTGCT GTAGAGATGG AAGCGACGGC AATCGCCCAT
GTCTGCCACA ATTTCAACGT CCCGTTTGTT GTCGTACGCG CCATCTCCGA CGTGGCCGAT
CAACAGTCTC ATCTTAGCTT CGATGAGTTC CTGGCTGTTG CCGCTAAACA GTCCAGCCTG
ATGGTTGAGT CACTGGTGCA GAAACTGGCA CATGGCTAA
|
|---|
| Protein sequence | MKIGIIGAME EEVTLLRDKI ENRQTISLGG CEIYTGQLNG TEVALLKSGI GKVAAALGAT
LLLEHCKPDV IINTGSAGGL APTLKVGDIV VSDEARYHDA DVTAFGYEYG QLPGCPAGFK
ADDKLIAAAE ACIAELNLNA VRGLIVSGDA FINGSVGLAK IRHNFPQAIA VEMEATAIAH
VCHNFNVPFV VVRAISDVAD QQSHLSFDEF LAVAAKQSSL MVESLVQKLA HG
|
|---|
| |