| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0139 |
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| Symbol | hrpB |
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| ID | 6271928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 149175 |
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| End bp | 151604 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641724392 |
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| Product | ATP-dependent RNA helicase HrpB |
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| Protein accession | YP_001878951 |
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| Protein GI | 187730081 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGTCGT TGCCCGTTGC TGCCGTCTTA CCTGAATTAC TTACCGCTCT CGATTGTGCG
CCGCAGGTAT TATTAAGTGC GCCGACCGGG GCCGGGAAAT CAACCTGGCT GCCGCTGCAA
CTGCTGGCGC ATCCCGGCAT TAACGGGAAA ATTATCCTGC TGGAGCCGCG TCGTCTGGCG
GCGCGTAACG TCGCGCAACG GCTGGAGGAG CTGCTTAACG AAAAGCCAGG CGATACCGTT
GGCTACCGGA TGCGTGCGCA AAACTGCGTC GGGCCGAATA CCCGCCTGGA AGTAGTTACC
GAAGGCGTGC TGACGCGGAT GATCCAGCGT GACCCGGAGT TGAGCGGTGT TGGATTGGTG
ATCCTTGATG AATTTCATGA GCGTAGCTTG CAGGCGGATT TGGCGTTGGC GCTGTTACTC
GATGTGCAAC AAGGTCTGCG TGATGACCTT AAACTGCTAA TTATGTCGGC TACGCTGGAC
AACGACCGCT TGCAGCAAAT GCTGCCAGAA GCGTCCGTCG TCATCTCAGA AGGGCGCTCG
TTTCCGGTTG AACGCCGTTA TTTACCGCTG CCCGCGCATC AGCGTTTTGA CGATGCCGTT
GCGGTAGCCA CCGCTGAAAT GCTGCGTCAG GAAAGCGGAT CATTACTGTT ATTTTTACCT
GGCGTCGGAG AAATTCAGCG TGTGCAGGAA CAACTGGCTT CGCGCATCGG CAGTGATGTA
TTGCTCTGCC CGCTGTATGG CGCGTTGTCG CTGAACGATC AGCGAAAAGC GATCCTCCCG
GCACCGCAAG GGATGCGCAA AGTGGTGCTG GCGACCAATA TTGCTGAAAC CAGTTTAACC
ATCGAAGGTA TTCGTCTGGT GGTGGATTGT GCCCAGGAGC GTGTGGCGCG TTTTGATCCG
CGCACGGGGC TAACGCGACT GATTACTCAA CGCGTTAGCC AGGCATCCAT GACGCAGCGT
GCCGGGCGCG CCGGGCGTCT GGAGCCGGGT ATCTGCCTGC ATCTAATCGC CAAAGAACAA
GCAGAACGCG CTGCCGCGCA AAGTGAACCG GAAATCTTAC AAAGCGATCT TTCCGGTTTG
CTGATGGAAT TACTGCAATG GGGATGCAGC GATCCGGCGC AGATGAGCTG GCTGGATCAA
CCGCCAACGG TGAATCTACT GGCCGCGAAA CGCCTGTTAC AAATGCTGGG GGCGCTGGAG
GGTGAACGGC TTAGTGCGCA GGGGCAAAAA ATGGCAGCGC TGGGTAACGA TCCGCGTTTA
GCGGCAATGC TGGTTAGCGC GAAGAACGAC GACGAAGCTG CTACCGCGGC AAAAATTGCC
GCCATTCTCG AAGAGCCGCC ACGGATGGGC AATAGTGACC TGGGCGTGGC GTTTTCGCGC
AATCAACCAG CCTGGCAGCA ACGTAGTCAG CAACTGTTAA AACGCTTAAA CGTACGTGGC
GGTGAGGCAG ACAGTTCGCT TATCGCGCCG CTACTTGCCG GGGCGTTTGC CGATCGCATT
GCTCGTCGCC GTGGGCAAGA TGGACGCTAT CAACGGGCAA ACGGCATGGG AGCGATGCTC
GATGCCGACG ACGCGCTAAG CCGCCACGAA TGGTTGATCG CACCGTTATT ATTGCAGGGC
AGCGCCTCGC CGGATGCGCG GATTTTACTG GCGCTGCCGG TCGATATTGA TGAGTTAGTA
CAACGCTGCC CGCAGCTGGT ACAGCAGTCT GACACTGTGG AGTGGGATGA CGCGCAAGGT
ACGCTGAAAG CCTGGCGTCG GCTGCAAATC GGTCTGCTGA CGGTGAAAGT GCAGCCGCTG
GCGAAACCCT CGGAAGACGA GTTGCATCAG GCGATGCTTA ATGGCATCCG TGATAAAGGT
TTAAGCGTGC TCAACTGGAC GGCGGAAGCG GAACAGCTAC GCTTGCGTTT GTTATGCGCC
GCAAAGTGGT TGCCGGAATA TGACTGGCCA GCGGTTGATG ATGAAAGTTT ATTGGCGACG
CTGGAAACGT GGCTGCTGCC ACATATGACT GGCGTACATT CACTACGCGG CCTGAAATCA
CTCGACATTT ATCAGGCACT ACGCGGATTA CTTGATTGGG GAATGCAGCA ACGTCTGGAT
AGTGAATTGC CTGCGCATTA CACTGTGCCG ACGGGAAGCC GGATCGCTAT TCGTTATCAT
GAAGATAACC CGCCCGCGCT GGCGGTGAGA ATGCAAGAGA TGTTTGGCGA GGCCACCAAT
CCGACGATCG CCCAGGGGCG CGTGCCGCTG GTGCTGGAGT TGCTTTCACC TGCCCAAAGG
CCATTACAAA TCACACGAGA TTTGAGCGCC TTCTGGAAAG GAGCGTACCG TGAGGTGCAA
AAAGAGATGA AAGGGCGTTA TCCCAAACAT GTCTGGCCGG ACGACCCGGC AAATACTGCA
CCGACGCGAC GGACGAAAAA GTATTCGTAA
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| Protein sequence | MSSLPVAAVL PELLTALDCA PQVLLSAPTG AGKSTWLPLQ LLAHPGINGK IILLEPRRLA
ARNVAQRLEE LLNEKPGDTV GYRMRAQNCV GPNTRLEVVT EGVLTRMIQR DPELSGVGLV
ILDEFHERSL QADLALALLL DVQQGLRDDL KLLIMSATLD NDRLQQMLPE ASVVISEGRS
FPVERRYLPL PAHQRFDDAV AVATAEMLRQ ESGSLLLFLP GVGEIQRVQE QLASRIGSDV
LLCPLYGALS LNDQRKAILP APQGMRKVVL ATNIAETSLT IEGIRLVVDC AQERVARFDP
RTGLTRLITQ RVSQASMTQR AGRAGRLEPG ICLHLIAKEQ AERAAAQSEP EILQSDLSGL
LMELLQWGCS DPAQMSWLDQ PPTVNLLAAK RLLQMLGALE GERLSAQGQK MAALGNDPRL
AAMLVSAKND DEAATAAKIA AILEEPPRMG NSDLGVAFSR NQPAWQQRSQ QLLKRLNVRG
GEADSSLIAP LLAGAFADRI ARRRGQDGRY QRANGMGAML DADDALSRHE WLIAPLLLQG
SASPDARILL ALPVDIDELV QRCPQLVQQS DTVEWDDAQG TLKAWRRLQI GLLTVKVQPL
AKPSEDELHQ AMLNGIRDKG LSVLNWTAEA EQLRLRLLCA AKWLPEYDWP AVDDESLLAT
LETWLLPHMT GVHSLRGLKS LDIYQALRGL LDWGMQQRLD SELPAHYTVP TGSRIAIRYH
EDNPPALAVR MQEMFGEATN PTIAQGRVPL VLELLSPAQR PLQITRDLSA FWKGAYREVQ
KEMKGRYPKH VWPDDPANTA PTRRTKKYS
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