Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0127 |
Symbol | panB |
ID | 6271063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 140434 |
End bp | 141228 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641724381 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_001878940 |
Protein GI | 187733671 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.785356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCGA CCACCATTGC TTCACTTCAG AAATGTAAGC AGGATAAAAA GCGTTTCGCG ACCATCACCG CTTACGACTA CAGCTTCGCG AAACTATTTG CTGATGAAGG ACTTAACGTC ATGCTGGTAG GCGACTCGCT GGGCATGACG GTTCAGGGTC ACGACTCCAC CCTGCCGGTG ACCGTTGCCG ATATCGCCTA CCACACTGCC TCCGTACGTC GTGGTGCGCC AAACTGCCTG CTGTTGGCTG ACCTGCCGTT TATGGCGTAT GCCACGCCGG AACAAGCCTT TGAAAACGCC GCAACGGTTA TGCGTGCCGG TGCCAATATG GTCAAAATTG AGGGCGGTGA GTGGCTGGTC GAAACCGTAA AAATGCTGAC CGAACGTGCC GTTCCTGTAT GTGGTCACTT AGGTTTAACC CCACAGTCAG TGAATATTTT CGGTGGCTAC AAAGTTCAGG GGCGCGGCGA TGAAGCGGGC GATCAACTGC TCAGCGATGC ATTAGCCTTA GAAGCCGCTG GGGCACAGCT GCTGGTGCTG GAATGCGTGC CGGTTGAACT GGCAAAACGT ATTACCGAAG CACTGGCGAT CCCGGTTATT GGCATTGGCG CAGGCAACGT CACTGACGGG CAGATCCTCG TGATGCACGA CGCCTTCGGC ATTACCGGCG GTCACATTCC TAAATTCGCT AAAAATTTCC TCGCCGAAAC GGGCGACATC CGCGCGGCTG TGCGGCAGTA TATGGCTGAA GTGGAGTCCG GCGTTTATCC GGGCGAAGAA CACAGTTTCC ATTAA
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Protein sequence | MKPTTIASLQ KCKQDKKRFA TITAYDYSFA KLFADEGLNV MLVGDSLGMT VQGHDSTLPV TVADIAYHTA SVRRGAPNCL LLADLPFMAY ATPEQAFENA ATVMRAGANM VKIEGGEWLV ETVKMLTERA VPVCGHLGLT PQSVNIFGGY KVQGRGDEAG DQLLSDALAL EAAGAQLLVL ECVPVELAKR ITEALAIPVI GIGAGNVTDG QILVMHDAFG ITGGHIPKFA KNFLAETGDI RAAVRQYMAE VESGVYPGEE HSFH
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