| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0108 |
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| Symbol | aceF |
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| ID | 6273242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 117321 |
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| End bp | 119213 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641724364 |
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| Product | dihydrolipoamide acetyltransferase |
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| Protein accession | YP_001878923 |
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| Protein GI | 187730023 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.313744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATCG AAATCAAAGT ACCGGACATC GGGGCTGATG AAGTTGAAAT CACCGAGATC
CTGGTCAAAG TGGGCGACAA AGTTGAAGCC GAACAGTCGC TGATCACCGT AGAAGGCGAC
AAAGCCTCTA TGGAAGTTCC GTCTCCGCAG GCGGGTATCG TTAAAGAGAT CAAAGTCTCT
GTTGGCGATA AAACCCAGAC CGGCGCACTG ATTATGATTT TCGATTCCGC CGACGGTGCA
GCAGACGCTG CACCTGCTCA GGCAGAAGAG AAGAAAGAAG CAGCTCCGGC AGCAGCACCC
GCGGCTGCGG CGGCAAAAGA CGTTAACGTT CCGGATATCG GCAGCGACGA AGTTGAAGTG
ACCGAAATCC TGGTGAAAGT TGGCGATAAA GTTGAAGCTG AACAGTCGCT GATCACCGTA
GAAGGCGATA AAGCTTCTAT GGAAGTTCCG GCTCCGTTTG CTGGCACCGT GAAAGAGATC
AAAGTGAACG TGGGTGACAA AGTGTCTACC GGCTCGCTGA TTATGGTCTT CGAAGTCGCG
GGTGAAGCAG GCGCGGCAGC TCCGGCGGCT AAACAGGAAG CGGCTCCGGC AGCGGCCCCT
GCACCAGCAG CTGGCGTGAA AGAAGTTAAC GTTCCGGATA TCGGCGGTGA CGAAGTTGAA
GTGACTGAAG TGATGGTGAA AGTGGGCGAC AAAGTTGCCG CTGAACAGTC ACTGATCACC
GTAGAAGGCG ACAAAGCTTC TATGGAAGTT CCGGCGCCGT TTGCAGGCGT CGTGAAGGAA
CTGAAAGTCA ACGTTGGCGA TAAAGTGAAA ACTGGCTCGC TGATTATGAT CTTCGAAGTT
GAAGGCGCAG CGCCTGCGGC AGCTCCTGCG AAACAGGAAG CGGCAGCGCC GGCACCGGCA
GCAAAAGCTG AAGCCCCGGC AGCAGCACCA GCTGCGAAAG CGGAAGGCAA ATCTGAATTT
GCTGAAAACG ACGCTTATGT TCACGCGACT CCGCTGATCC GCCGTCTGGC ACGCGAGTTT
GGTGTTAACC TAGCGAAAGT GAAGGGCACT GGCCGTAAAG GTCGTATCCT GCGCGAAGAC
GTTCAGGCTT ACGTGAAAGA AGCTATCAAA CGTGCAGAAG CAGCTCCGGC GGCGACTGGC
GGCGGTATCC CAGGCATGCT GCCGTGGCCG AAGGTGGACT TCAGCAAGTT TGGTGAAATC
GAAGAAGTGG AACTGGGCCG TATCCAGAAA ATTTCTGGTG CTAACCTGAG CCGTAACTGG
GTGATGATCC CGCATGTTAC CCACTTCGAC AAAACCGATA TCACCGAGCT GGAAGCGTTC
CGTAAACAGC AGAACGAAGA AGCGGCGAAA CGTAAGCTGG ATGTGAAGAT CACCCCGGTT
GTCTTCATCA TGAAAGCCGT TGCTGCAGCT CTTGAGCAGA TGCCTCGCTT CAATAGTTCG
CTGTCGGAAG ACGGTCAGCG TCTGACCCTG AAGAAATACA TCAACATCGG TGTGGCGGTG
GATACCCCGA ACGGTCTGGT TGTTCCGGTA TTCAAAGACG TCAACAAGAA AGGCATCATC
GAGCTGTCTC GCGAGCTGAT GACTATTTCT AAGAAAGCGC GTGACGGTAA GCTGACTGCG
GGCGAAATGC AGGGCGGTTG CTTCACCATC TCCAGCATCG GCGGCCTGGG TACTACCCAC
TTCGCGCCGA TTGTGAACGC GCCGGAAGTG GCTATCCTCG GCGTTTCCAA GTCCGCGATG
GAGCCGGTGT GGAATGGTAA AGAGTTCGTG CCGCGTCTGA TGCTGCCGAT TTCTCTCTCC
TTCGACCACC GCGTGATCGA CGGTGCTGAT GGTGCCCGTT TCATTACCAT CATTAACAAC
ACGCTGTCTG ACATTCGCCG TCTGGTGATG TAA
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| Protein sequence | MAIEIKVPDI GADEVEITEI LVKVGDKVEA EQSLITVEGD KASMEVPSPQ AGIVKEIKVS
VGDKTQTGAL IMIFDSADGA ADAAPAQAEE KKEAAPAAAP AAAAAKDVNV PDIGSDEVEV
TEILVKVGDK VEAEQSLITV EGDKASMEVP APFAGTVKEI KVNVGDKVST GSLIMVFEVA
GEAGAAAPAA KQEAAPAAAP APAAGVKEVN VPDIGGDEVE VTEVMVKVGD KVAAEQSLIT
VEGDKASMEV PAPFAGVVKE LKVNVGDKVK TGSLIMIFEV EGAAPAAAPA KQEAAAPAPA
AKAEAPAAAP AAKAEGKSEF AENDAYVHAT PLIRRLAREF GVNLAKVKGT GRKGRILRED
VQAYVKEAIK RAEAAPAATG GGIPGMLPWP KVDFSKFGEI EEVELGRIQK ISGANLSRNW
VMIPHVTHFD KTDITELEAF RKQQNEEAAK RKLDVKITPV VFIMKAVAAA LEQMPRFNSS
LSEDGQRLTL KKYINIGVAV DTPNGLVVPV FKDVNKKGII ELSRELMTIS KKARDGKLTA
GEMQGGCFTI SSIGGLGTTH FAPIVNAPEV AILGVSKSAM EPVWNGKEFV PRLMLPISLS
FDHRVIDGAD GARFITIINN TLSDIRRLVM
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