| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0104 |
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| Symbol | ampE |
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| ID | 6270499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 110907 |
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| End bp | 111761 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641724360 |
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| Product | regulatory protein AmpE |
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| Protein accession | YP_001878919 |
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| Protein GI | 187732020 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3725] Membrane protein required for beta-lactamase induction |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.325186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTAT TTACAACCTT ACTGGTGTTA ATTTTCGAGC GCCTGTTTAA GTTGGGCGAG
CACTGGCAGC TTGATCATCG TCTTGAAGCG TTCTTTCGGC GGGTGAAACA TTTTTCTCTC
GGGCGCACGT TAGGCATGAC CATTATTGCG ATGGGCGTGA CTTTTTTACT GTTACGCGCA
TTGCAGGGAG TATTGTTCAA CGTTCCCACG CTGCTGGTGT GGCTGCTGAT TGGTTTGCTG
TGTATTGGCG CAGGTAAAGT TCGTCTTCAT TATCATGCTT ATCTGACAGC TGCTTCACGT
AATGATAGCC ATGCCCGTGT CACGATGGCT GGCGAACTCA CCATGATTAA CGGCGTCCCG
GCAGGCTGCG ATGAACGTGA GTATTTGCGT GAGCTGCAAA ATGCATTGCT GTGGATTAAC
TTTCGTTTTT ATCTTGCTCC GCTGTTCTGG TTGATTGTGG GGGGAATCTG GGGACCCGTT
ACGCTGATGG GGTATGCGTT TTTGCGTGCA TGGCAATACT GGCTGGCGCG ATACCAGACG
CCGCATCATC GTTTACAGTC CGGCATTGAT GCCGTGCTTC ATGTACTGGA TTGGGTGCCG
GTTCGTCTTG CGGGTGTGGT ATATGCCTTG ATCGGTCATG GGGAGAAAGC GTTACCGGCC
TGGTTTGCTT CGCTGGGTGA CTTCCATACT TCGCAGTATC AGGTGTTAAC GCGTCTGGCG
CAGTTCTCTC TGGCGCGTGA ACCGCATGTC GATAAGGTGG AGACGCCGAA GGCAGCGGTT
TCAATGGCGA AGAAAACCTC GTTCGTGGTC GTGGTGGTGA TTGCACTACT GACGATTTAC
GGGGCGTTGG TGTAA
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| Protein sequence | MTLFTTLLVL IFERLFKLGE HWQLDHRLEA FFRRVKHFSL GRTLGMTIIA MGVTFLLLRA
LQGVLFNVPT LLVWLLIGLL CIGAGKVRLH YHAYLTAASR NDSHARVTMA GELTMINGVP
AGCDEREYLR ELQNALLWIN FRFYLAPLFW LIVGGIWGPV TLMGYAFLRA WQYWLARYQT
PHHRLQSGID AVLHVLDWVP VRLAGVVYAL IGHGEKALPA WFASLGDFHT SQYQVLTRLA
QFSLAREPHV DKVETPKAAV SMAKKTSFVV VVVIALLTIY GALV
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