Gene SbBS512_E0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0081 
SymbolmurD 
ID6268939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp88056 
End bp89372 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content55% 
IMG OID641724339 
ProductUDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 
Protein accessionYP_001878898 
Protein GI187732828 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase 
TIGRFAM ID[TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATT ATCAGGGTAA AAATGTCGTC ATTATCGGCC TGGGCCTCAC CGGGCTTTCC 
TGCGTGGACT TTTTCCTCGC TCGCGGTGTG ACGCCGCGCG TTATGGATAC GCGTATGACA
CCGCCTGGCC TGGATAAATT ACCCGAAGCC GTAGAACGCC ACACGGGCAG TCTGAATGAT
GAATGGCTGA TGGCGGCAGA TCTGATTGTC GCCAGTCCCG GTATTGCACG GGCGCATCCA
TCCTTAAGCG CTGCCGCTGA TGCCGGAATC GAAATCGTTG GCGATATCGA GCTGTTCTGC
CGCGAAGCAC AAGCACCGAT TGTGGCGATT ACCGGTTCTA ACGGCAAAAG CACGGTCACC
ACGCTAGTGG GTGAAATGGC GAAAGCGGCG GGGGTTAACG TTGGTGTGGG TGGCAATATT
GGCCTGCCAG CGTTGATGCT GCTTGATGCT GAGTGCGAAC TGTACGTGCT GGAACTGTCG
AGCTTCCAGC TGGAAACCAC TTCCAGCTTA CAGGCGGTGG CGGCGACCAT TCTGAACGTG
ACTGAAGATC ATATGGACCG CTATCCGTTT GGTTTGCAGC AATACCGTGC GGCAAAATTG
CGTATTTACG AAAATGCGAA AGTTTGTGTC GTCAATGCTG ATGATGCCTT AACAATGCCG
ATTCGCGGTG CTGATGAACG CTGCGTCAGC TTTGGCGTCA ACATGGGTGA CTATCACCTG
AATCATCAGC AGGGAGAAAC CTGGCTGCGA GTGAAAGGCG AGAAAGTGCT GAACGTGAAA
GAGATGAAAC TTTCTGGGCA GCATAACTAC ACCAATGCGC TGGCAGCACT GGCACTGGCA
GACGCAGCTG GTTTGCCGCG CGCCAGCAGC CTGAAAGCGT TAACCACCTT CACCGGTCTG
CCGCATCGCT TTGAAGTGGT GCTGGAGCAC AATGGCGTAC GCTGGATTAA CGATTCGAAA
GCCACTAACG TCGGCAGTAC GGAAGCGGCG TTGAATGGCT TGCAGGTAGA CGGCACGCTG
CATTTGTTGC TGGGCGGCGA TGGTAAATCG GCGGACTTCA GTCCACTGGC GCGCTATCTG
AATGGCGACA ACGTGCGTTT GTACTGTTTT GGTCGTGACG GTGCGCAGCT GGCGGCGCTA
CGCCCGGAAG TGGCAGAACA AACCGAAACT ATGGAACAGG CGATGCGCTT GCTGGCTCCG
CGTGTTCAGC CGGGCGATAT GGTTCTGCTC TCCCCGGCCT GTGCCAGCCT TGATCAGTTC
AAGAACTTTG AACAACGAGG CAATGAGTTT GCCCGTCTGG CGAAGGAGTT AGGTTGA
 
Protein sequence
MADYQGKNVV IIGLGLTGLS CVDFFLARGV TPRVMDTRMT PPGLDKLPEA VERHTGSLND 
EWLMAADLIV ASPGIARAHP SLSAAADAGI EIVGDIELFC REAQAPIVAI TGSNGKSTVT
TLVGEMAKAA GVNVGVGGNI GLPALMLLDA ECELYVLELS SFQLETTSSL QAVAATILNV
TEDHMDRYPF GLQQYRAAKL RIYENAKVCV VNADDALTMP IRGADERCVS FGVNMGDYHL
NHQQGETWLR VKGEKVLNVK EMKLSGQHNY TNALAALALA DAAGLPRASS LKALTTFTGL
PHRFEVVLEH NGVRWINDSK ATNVGSTEAA LNGLQVDGTL HLLLGGDGKS ADFSPLARYL
NGDNVRLYCF GRDGAQLAAL RPEVAEQTET MEQAMRLLAP RVQPGDMVLL SPACASLDQF
KNFEQRGNEF ARLAKELG