| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0059 |
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| Symbol | thiP |
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| ID | 6271736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 63975 |
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| End bp | 65585 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641724318 |
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| Product | thiamine transporter membrane protein |
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| Protein accession | YP_001878878 |
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| Protein GI | 187732002 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | [TIGR01253] thiamine ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACGC GCCGTCAGCC GTTAATTCCC GGCTGGTTAA TTCCAGGTGT AAGCGCCGCC
ACGCTGGTGG TAGCGGTTGC GCTCGCGGCG TTTCTCGCCC TGTGGTGGAA CGCGCCGCAG
GGTAACTGGG TGGCAGTCTG GCAGGACAGC TACCTGTGGC ATGTGGTGCG CTTCTCCTTC
TGGCAGGCGT TTCTCTCGGC GCTACTCTCT GTCGTACCCG CGATATTCCT CGCCCGCGCC
CTCTATCGCA GGCGCTTTCC GGGTCGGCTG GCGCTGTTGC GTCTGTGCGC AATGACCTTG
ATCCTCCCGG TGCTGGTTGC TGTTTTCGGC ATTCTTAGCG TCTATGGTCG CCAGGGCTGG
CTGGCATCGC TCTGCCAATC GCTCGGTCTG GAGTGGACCT TTTCGCCCTA CGGCCTGCAA
GGTATTTTGC TGGCGCACGT ATTTTTTAAT CTGCCGATGG CGAGCCGCTT ATTACTCCAG
GCACTGGAAA ACATTCCCGA CGAACAACGT CAGCTTGCCG CCCAGCTTGG GATGCGCGGC
TGGCATTTTT TCCGCTTCGT CGAATGGCCG TGGTTACGGC GACAAATCCC GCCGGTTGCT
GCACTTATCT TTATGCTCTG TTTCGCCAGC TTCGCCACCG TGCTATCACT GGGCGGCGGT
CCGCAGGCGA CCACTATCGA GCTGGCTATT TATCAGGCGC TGAGTTACGA CTACGATCCT
GCCCGCGCGG CGATGCTGGC GCTGATCCAG ATGGTGTGTT GCCTTGGGCT GGTACTGTTG
AGTCAGCGAT TGAGTAAGGC CATTGCGCCA GGCACCACGC TGCTGCAAGG CTGGCGCGAC
CCGGACGATC GTCTGCATAG CCGCATTTGC GACACGGTGT TAATAGTGCT GGCGCTGCTG
CTGTTGTTGC CACCGTTGCT GGCGGTGATC GTCGATGGGG TAAATCGCCA GTTGCCGGAA
GTGCTGGCAC AACCGGTGCT GTGGCAGGCG CTGTGGACCT CGTTGCGTAT TGCGCTGGCG
GCAGGTGTAT TGTGCGTAGT GCTGACCATG ATGCTGCTAT GGAGCAGTCG CGAACTTCGG
GCGCGGCAGA AAATGCTGGC GGGTCAGGCG CTGGAGATGA GCGGCATGTT GATTCTCGCC
ATGCCGGGGA TTGTGCTGGC TACCGGCTTC TTTTTACTGC TCAACAACAC TATCGGCCTG
CAACAATCTG CTGACGGCAT TGTGATTTTC ACCAATGCGT TAATGGCGAT CCCTTATGCG
CTGAAAGTAC TGGAAAACCC GATGCGCGAT ATCACCGCCC GCTACAGTAT GTTGTGTCAG
TCGCTGGGCA TTGAAGGCTG GTCGCGCTTA AAAGTGGTGG AGCTGCGCGC CCTGAAACGT
CCACTGGCGC AGGCGCTGGC CTTTGCCTGC GTGCTGTCGA TTGGTGATTT TGGCGTGGTG
GCGTTGTTCG GTAACGATGA TTTCCGTACC CTGCCGTTTT ATCTCTACCA GCAAATTGGC
TCCTATCGCA GCCAGGACGG CGCGGTCACC GCGTTAATTC TGCTGCTACT CTGTTTTCTG
CTGTTTACCG TGATTGAAAA ACTACCGGGG CGAAATGTTA AAACTGACTG A
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| Protein sequence | MATRRQPLIP GWLIPGVSAA TLVVAVALAA FLALWWNAPQ GNWVAVWQDS YLWHVVRFSF
WQAFLSALLS VVPAIFLARA LYRRRFPGRL ALLRLCAMTL ILPVLVAVFG ILSVYGRQGW
LASLCQSLGL EWTFSPYGLQ GILLAHVFFN LPMASRLLLQ ALENIPDEQR QLAAQLGMRG
WHFFRFVEWP WLRRQIPPVA ALIFMLCFAS FATVLSLGGG PQATTIELAI YQALSYDYDP
ARAAMLALIQ MVCCLGLVLL SQRLSKAIAP GTTLLQGWRD PDDRLHSRIC DTVLIVLALL
LLLPPLLAVI VDGVNRQLPE VLAQPVLWQA LWTSLRIALA AGVLCVVLTM MLLWSSRELR
ARQKMLAGQA LEMSGMLILA MPGIVLATGF FLLLNNTIGL QQSADGIVIF TNALMAIPYA
LKVLENPMRD ITARYSMLCQ SLGIEGWSRL KVVELRALKR PLAQALAFAC VLSIGDFGVV
ALFGNDDFRT LPFYLYQQIG SYRSQDGAVT ALILLLLCFL LFTVIEKLPG RNVKTD
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