Gene SbBS512_E0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0049 
SymboldjlA 
ID6269119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp49905 
End bp50720 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content52% 
IMG OID641724308 
ProductDna-J like membrane chaperone protein 
Protein accessionYP_001878868 
Protein GI187730491 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1076] DnaJ-domain-containing proteins 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000477601 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTATT GGGGAAAAAT CATTGGCGTG GCCGTGGCCT TACTTATGGG CGGCGGCTTT 
TGGGGCGTAG TGTTAGGCCT GTTAATTGGC CATATGTTTG ATAAAGCCCG TAGCCGTAAA
ATGGCGTGGT TCGCCAACCA GCGTGAGCGT CAGGCGCTGT TTTTTGCCAC CACTTTTGAA
GTGATGGGGC ATTTAACCAA ATCCAAAGGT CGCGTCACGG AGGCTGATAT TCATATCGCC
AGCCAGCTGA TGGACCTAAT GAACCTTCAT GGCGCTTCCC GTACTGCGGC GCAAAACGCG
TTCCGGGTGG GAAAATCAGA CAATTACCCG CTGCGCGAAA AGATGCGCCA GTTTCGCAGT
GTCTGCTTTG GTCGTTTTGA CTTAATTCGT ATGTTTCTGG AGATCCAGAT TCAGGCGGCG
TTTGCTGATG GTTCACTGCA CCCGAATGAA CGGTCGGTGC TGTATGTCAT TGCAGAAGAA
TTAGGGATCT CCCGCGCCCA GTTTGACCAG TTTTTGCGCA TGATGCAGGG CGGTGCACAG
TTTGGCGGCG GTTATCAGCA GCAATCTGGC GGTGGTAACT GGCAGCAAGC GCAGCGTGGC
CCGACGCTGG AAGATGCCTG TAATGTGCTG GGTGTGAAGC CGACGGATGA TGCGACCACC
ATTAAACGAG CCTACCGTAA GCTGATGAAT GAACACCATC CCGATAAGCT GGTGGCGAAA
GGTTTGCCGC CTGAGATGAT GGAGATGGCG AAGCAGAAAG CGCAGGAAAT TCAGCAGGCA
TATGAGCTGA TAAAGCAGCA GAAAGGGTTT AAATAA
 
Protein sequence
MQYWGKIIGV AVALLMGGGF WGVVLGLLIG HMFDKARSRK MAWFANQRER QALFFATTFE 
VMGHLTKSKG RVTEADIHIA SQLMDLMNLH GASRTAAQNA FRVGKSDNYP LREKMRQFRS
VCFGRFDLIR MFLEIQIQAA FADGSLHPNE RSVLYVIAEE LGISRAQFDQ FLRMMQGGAQ
FGGGYQQQSG GGNWQQAQRG PTLEDACNVL GVKPTDDATT IKRAYRKLMN EHHPDKLVAK
GLPPEMMEMA KQKAQEIQQA YELIKQQKGF K