Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0034 |
Symbol | rihC |
ID | 6271601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 30817 |
End bp | 31731 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641724294 |
Product | ribonucleoside hydrolase RihC |
Protein accession | YP_001878854 |
Protein GI | 187732027 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTTTAC CTATCTTCCT CGATACTGAC CCCGGCATTG ACGATGCCGT CGCCATTGCC GCCGCGATTT TTGCACCCGA ACTCGACCTG CAACTGATGA CCACCGTCGC GGGTAATGTC TCGGTTGAGA AAACCACCCG CAACGCCCTG CAACTGCTGC ATTTCTGGAA TGCGGAGATT CCGCTCGCCC AGGGAGCCGC TGTGCCGCTG GTACGCGCAC CGCGTGATGC GGCATCTGTG CACGGCGAAT CGGGAATGGC TGGCTACGAC TTTGTTGAGC ACAACCGAAA GCCGCTCGGG ATACCAGCGT TTCTGGCGAT TCGGGATGCC CTGATGCGTG CACCAGAGCC CGTTACCCTG GTGGCCATCG GCCCGTTAAC CAATATTGCG CTGTTACTTT CACAATGCCC GGAATGTAAA CCGTATATTC GTCGTCTGGT GATCATGGGC GGTTCTGCTG GTCGCGGCAA CTGCACACCA AACGCCGAGT TTAATATCGC TGCCGATCCA GAAGCGGCTG CCTGTGTCTT CCGTAGCGGC ATCGAAATCG TCATGTGCGG TCTGGATGTC ACCAATCAGG CAATATTAAC CCCTGACTAT CTCGCTACTT TGCCGGAGTT GAATCGCACC GGAAAAATGC TCCACGCCCT GTTTAGCCAC TACCGTAGCG GCAGTATGCA AAGTGGACTG CGTATGCACG ATCTTTGCGC TATTGCCTTG CTGGTGCGCC CGGAATTGTT CACTCTCAAA CCGTGTTTTG TGGCAGTGGA AACTCAGGGC GAATTTACCT CAGGCACGAC GGTGGTTGAT ATCGACGGTT GCCTGGGCAA ACCAGCCAAT GTAAAGGTGG CATTGGATCT GGATGTGAAA GGCTTCCAGC AGTGGGTGGC TGAGGTGCTG GCTCTGGCGT CGTAA
|
Protein sequence | MRLPIFLDTD PGIDDAVAIA AAIFAPELDL QLMTTVAGNV SVEKTTRNAL QLLHFWNAEI PLAQGAAVPL VRAPRDAASV HGESGMAGYD FVEHNRKPLG IPAFLAIRDA LMRAPEPVTL VAIGPLTNIA LLLSQCPECK PYIRRLVIMG GSAGRGNCTP NAEFNIAADP EAAACVFRSG IEIVMCGLDV TNQAILTPDY LATLPELNRT GKMLHALFSH YRSGSMQSGL RMHDLCAIAL LVRPELFTLK PCFVAVETQG EFTSGTTVVD IDGCLGKPAN VKVALDLDVK GFQQWVAEVL ALAS
|
| |