Gene SbBS512_E0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0026 
Symbol 
ID6271631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp23868 
End bp24161 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content52% 
IMG OID641724286 
ProductIS1 OrfB 
Protein accessionYP_001878846 
Protein GI187731181 
COG category[L] Replication, recombination and repair 
COG ID[COG1662] Transposase and inactivated derivatives, IS1 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000000122781 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGCACG TCTTCGGTGA ACGCACTCTG GCCACACTGG AGCGTCTTCT GAGCCTGCTG 
TCGGCCTTTG AGGTCGTGGT ATGGATGACG GATGGCTGGC CGCTGTATGA ATCACGCCTG
AAGGGAAAGC TGCACGTTAT CAGCAAGCGT TACACTCAGC GCATTGAGCG ACATAATCTG
AATCTGAGAC AACATCTGGC AAGGCTGGGA CGGAAGTCAC TGTCGTTCTC AAAATCGGTG
GAGCTGCATG ACAAGGTCAT CGGGCATTAT CTGAACATAA AACACTATCA GTAA
 
Protein sequence
MAHVFGERTL ATLERLLSLL SAFEVVVWMT DGWPLYESRL KGKLHVISKR YTQRIERHNL 
NLRQHLARLG RKSLSFSKSV ELHDKVIGHY LNIKHYQ