Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0026 |
Symbol | |
ID | 6271631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 23868 |
End bp | 24161 |
Gene Length | 294 bp |
Protein Length | 97 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641724286 |
Product | IS1 OrfB |
Protein accession | YP_001878846 |
Protein GI | 187731181 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1662] Transposase and inactivated derivatives, IS1 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000000000122781 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGCACG TCTTCGGTGA ACGCACTCTG GCCACACTGG AGCGTCTTCT GAGCCTGCTG TCGGCCTTTG AGGTCGTGGT ATGGATGACG GATGGCTGGC CGCTGTATGA ATCACGCCTG AAGGGAAAGC TGCACGTTAT CAGCAAGCGT TACACTCAGC GCATTGAGCG ACATAATCTG AATCTGAGAC AACATCTGGC AAGGCTGGGA CGGAAGTCAC TGTCGTTCTC AAAATCGGTG GAGCTGCATG ACAAGGTCAT CGGGCATTAT CTGAACATAA AACACTATCA GTAA
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Protein sequence | MAHVFGERTL ATLERLLSLL SAFEVVVWMT DGWPLYESRL KGKLHVISKR YTQRIERHNL NLRQHLARLG RKSLSFSKSV ELHDKVIGHY LNIKHYQ
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