Gene SbBS512_E0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E0018 
SymboldnaJ 
ID6271571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp16280 
End bp17410 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content55% 
IMG OID641724278 
Productchaperone protein DnaJ 
Protein accessionYP_001878838 
Protein GI187730634 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID[TIGR02349] chaperone protein DnaJ 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.129066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAGC AAGATTATTA CGAGATTTTA GGCGTTTCCA AAACAGCGGA AGAGCGTGAA 
ATCAAAAAGG CCTACAAACG CCTGGCCATG AAATACCACC CGGACCGTAA CCAGGGTGAC
AAAGAGGCCG AGGCGAAATT TAAAGAGATC AAGGAAGCTT ATGAAGTTCT GACCGACTCG
CAAAAACGTG CGGCATACGA TCAGTATGGT CATGCTGCGT TTGAGCAAGG CGGCATGGGC
GGCGGCGGTT TTGGCGGCGG CGCAGACTTC AGCGATATTT TTGGTGACGT TTTCGGCGAT
ATTTTTGGCG GCGGACGTGG TCGTCAACGT GCGGCGCGCG GTGCTGATTT ACGCTATAAC
ATGGAGCTCA CCCTCGAAGA AGCTGTACGT GGCGTGACCA AAGAGATCCG CATTCCGACT
CTGGAAGAGT GTGACGTTTG CCACGGTAGC GGTGCAAAAC CAGGTACACA GCCGCAGACC
TGTCCGACCT GTCATGGTTC TGGTCAGGTG CAGATGCGTC AGGGTTTCTT TGCCGTGCAG
CAGACCTGTC CACACTGTCA GGGCCGCGGT ACGCTGATCA AAGATCCGTG CAACAAATGT
CATGGTCATG GTCGTGTTGA GCGCAGCAAA ACGCTGTCCG TTAAAATCCC GGCAGGGGTG
GACACTGGAG ACCGCATCCG TCTTGCGGGC GAAGGTGAAG CGGGCCAGCA TGGCGCACCG
GCAGGCGATC TGTACGTTCA GGTTCAGGTT AAACAGCACC CGATTTTCGA GCGTGAAGGC
AACAACCTGT ATTGCGAAGT CCCGATCAAC TTCGCTATGG CGGCGCTGGG TGGCGAAATC
GAAGTACCGA CCCTTGATGG TCGCGTCAAA CTGAAAGTGC CTGGCGAAAC CCAGACCGGT
AAGCTTTTCC GTATGCGCGG TAAAGGCGTC AAGTCTGTCC GCGGTGGCGC ACAGGGTGAT
TTGCTGTGCC GCGTTGTCGT CGAAACACCG GTAGGCCTGA ACGAGAAGCA GAAACAGCTG
CTGCAAGAGC TGCAAGAAAG CTTCGGTGGC CCAACCGGCG AGCACAACAG CCCGCGCTCA
AAGAGCTTCT TTGATGGTGT GAAGAAGTTT TTTGACGACC TGACCCGCTA A
 
Protein sequence
MAKQDYYEIL GVSKTAEERE IKKAYKRLAM KYHPDRNQGD KEAEAKFKEI KEAYEVLTDS 
QKRAAYDQYG HAAFEQGGMG GGGFGGGADF SDIFGDVFGD IFGGGRGRQR AARGADLRYN
MELTLEEAVR GVTKEIRIPT LEECDVCHGS GAKPGTQPQT CPTCHGSGQV QMRQGFFAVQ
QTCPHCQGRG TLIKDPCNKC HGHGRVERSK TLSVKIPAGV DTGDRIRLAG EGEAGQHGAP
AGDLYVQVQV KQHPIFEREG NNLYCEVPIN FAMAALGGEI EVPTLDGRVK LKVPGETQTG
KLFRMRGKGV KSVRGGAQGD LLCRVVVETP VGLNEKQKQL LQELQESFGG PTGEHNSPRS
KSFFDGVKKF FDDLTR