Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0007 |
Symbol | agcS |
ID | 6271320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 6528 |
End bp | 7958 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641724267 |
Product | amino acid carrier protein |
Protein accession | YP_001878827 |
Protein GI | 187730478 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1115] Na+/alanine symporter |
TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGATT TTTTCTCCTT TATTAACAGC GTCCTTTGGG GATCGGTAAT GATTTACCTG CTCTTCGGCG CAGGTTGTTG GTTCACTTTT CGCACCGGAT TTGTGCAGTT TCGCTACATC CGCCAGTTTG GCAAAAGTCT TAAAAATAGC ATTCATCCAC AGCCAGGCGG TTTAACCTCA TTTCAGTCAT TGTGTACCAG TCTTGCGGCG CGCGTGGGTA GCGGCAACTT GGCCGGCGTT GCGCTGGCTA TTACCGCCGG TGGACCTAGA GCCGTCTTTT GGATGTGGGT TGCCGCGTTT ATCGGCATGG CGACCTCGTT TGCCGAATGT TCCCTTGCAC AACTTTATAA AGAACGTGAC GTCAATGGGC AGTTTCGTGG CGGACCGGCA TGGTATATGG CGCGCGGGCT GGGGATGCGT TGGATGGGCG TTCTGTTCGC CGTCTTTTTG CTCATCGCCT ACGGCATAAT TTTCAGCGGA GTTCAGGCGA ACGCCGTTGC CCGAGCCCTG AGTTTTTCTT TTGATTTTCC CCCGCTGGTG ACAGGCATTA TTCTCGCTGT CTTTGCTCTG CTGGCAATCA CTCGCGGTCT TCATGGCGTC GCCCGGCTCA TGCAGGGGTT TGTCCCGTTG ATGGCGATAA TCTGGGTGCT GACCAGCATG GTGATTTGCG TAATAAATAT CGGGCAACTT CCCCACGTCA TTTGGTCTAT TTTTGAGAGT GCTTTTGGCT GGCAGGAAGC GGCAGGCGGC GCGGCGGGAT ATACCTTAAG CCAGGCGATT ACTAACGGTT TTCAGCGCAG TATGTTTTCC AATGAGGCGG GAATGGGTTC GACGCCAAAC GCGGCAGCGG CAGCGGCGTC CTGGCCTCCG CATCCGGCAG CGCAAGGGAT TGTCCAGATG ATTGGCATTT TTATCGACAC CCTGGTCATC TGTACGGCAA GCGCCATGCT GATATTACTG GCGGGTAACG ACACAACCTA CATGCCGCTG GAAGGTATTC AGCTTATCCA GAAGGCGATG CGGGTGCTAA TGGGTTCCTG GGGTGCTGAG TTTGTTACCC TCGTGGTTAT TCTGTTTGCC TTCAGCTCCA TCGTTGCCAA CTACATTTAT GCCGAAAACA ATCTCTTCTT TTTACGCCTG AACACCCCTA AAGCGATCTG GTGTTTGCGG ATCTGCACCT TCGCAACGGT CATCGGCGGC ACCTTGCTAA GCCTTCCGCT GATGTGGCAA CTGGCAGATA TCATAATGGC CTGCATGGCT ATTACCAATT TGACCGCCAT TTTACTGCTC TCGCCTGTGG TTCATACCAT TGCCAGTGAT TATCTACGCC AGCGTAAACT CGGCGTGCGC CCGGTGTTTG ATCCGTTGCG TTATCCGGAT ATCGGTCGCC AGCTTTCTCC GGACGCGTGG GATGATGTTT CGCAGGAGTA A
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Protein sequence | MPDFFSFINS VLWGSVMIYL LFGAGCWFTF RTGFVQFRYI RQFGKSLKNS IHPQPGGLTS FQSLCTSLAA RVGSGNLAGV ALAITAGGPR AVFWMWVAAF IGMATSFAEC SLAQLYKERD VNGQFRGGPA WYMARGLGMR WMGVLFAVFL LIAYGIIFSG VQANAVARAL SFSFDFPPLV TGIILAVFAL LAITRGLHGV ARLMQGFVPL MAIIWVLTSM VICVINIGQL PHVIWSIFES AFGWQEAAGG AAGYTLSQAI TNGFQRSMFS NEAGMGSTPN AAAAAASWPP HPAAQGIVQM IGIFIDTLVI CTASAMLILL AGNDTTYMPL EGIQLIQKAM RVLMGSWGAE FVTLVVILFA FSSIVANYIY AENNLFFLRL NTPKAIWCLR ICTFATVIGG TLLSLPLMWQ LADIIMACMA ITNLTAILLL SPVVHTIASD YLRQRKLGVR PVFDPLRYPD IGRQLSPDAW DDVSQE
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